2023-12-08-0937

AMD EPYC 7402P 24-Core testing with a Supermicro H11SSL-i v2.00 (2.1 BIOS) and AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 on Ubuntu 22.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2312092-NE-20231208019
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
AMD EPYC 7402P 24-Core
December 08 2023
  1 Day, 7 Hours, 22 Minutes
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AMD EPYC 7402P 24-Core

Processor: AMD EPYC 7402P 24-Core @ 2.80GHz (24 Cores / 48 Threads), Motherboard: Supermicro H11SSL-i v2.00 (2.1 BIOS), Chipset: AMD Starship/Matisse, Memory: 128GB, Disk: 1000GB Western Digital WDS100T2B0C-00PXH0 + 4 x 2048GB ADATA LEGEND 710 + 11756GB HUH721212AL5204 + 4GB USB DISK 2.0 + 3 x 3001GB Western Digital WD30EFRX-68E + 18000GB Seagate ST18000NM000J-2T + 2000GB CT2000BX500SSD1, Graphics: AMD Radeon RX 5600 OEM/5600 XT / 5700/5700, Audio: AMD Navi 10 HDMI Audio, Network: 4 x Intel X710 for 10GbE SFP+ + 2 x Intel I210

OS: Ubuntu 22.04, Kernel: 5.15.0-89-generic (x86_64), Desktop: GNOME Shell 42.9, Display Server: X Server 1.21.1.4, OpenCL: OpenCL 2.1 AMD-APP (3590.0), Vulkan: 1.3.238, Compiler: GCC 11.4.0, File-System: ext4, Screen Resolution: 1024x768

Kernel Notes: Transparent Huge Pages: madvise
Environment Notes: NVM_CD_FLAGS=
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x830107a
Python Notes: Python 3.10.12
Security Notes: gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT enabled with STIBP protection + spec_rstack_overflow: Mitigation of safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

2023-12-08-0937OpenBenchmarking.orgPhoronix Test SuiteAMD EPYC 7402P 24-Core @ 2.80GHz (24 Cores / 48 Threads)Supermicro H11SSL-i v2.00 (2.1 BIOS)AMD Starship/Matisse128GB1000GB Western Digital WDS100T2B0C-00PXH0 + 4 x 2048GB ADATA LEGEND 710 + 11756GB HUH721212AL5204 + 4GB USB DISK 2.0 + 3 x 3001GB Western Digital WD30EFRX-68E + 18000GB Seagate ST18000NM000J-2T + 2000GB CT2000BX500SSD1AMD Radeon RX 5600 OEM/5600 XT / 5700/5700AMD Navi 10 HDMI Audio4 x Intel X710 for 10GbE SFP+ + 2 x Intel I210Ubuntu 22.045.15.0-89-generic (x86_64)GNOME Shell 42.9X Server 1.21.1.4OpenCL 2.1 AMD-APP (3590.0)1.3.238GCC 11.4.0ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerOpenCLVulkanCompilerFile-SystemScreen Resolution2023-12-08-0937 BenchmarksSystem Logs- Transparent Huge Pages: madvise- NVM_CD_FLAGS=- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x830107a- Python 3.10.12- gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT enabled with STIBP protection + spec_rstack_overflow: Mitigation of safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

2023-12-08-0937minibude: OpenMP - BM1minibude: OpenMP - BM1minibude: OpenMP - BM2minibude: OpenMP - BM2clomp: Static OMP Speedupnamd: ATPase Simulation - 327,506 Atomsamg: ffte: N=256, 3D Complex FFT Routinepennant: sedovbigpennant: leblancbigincompact3d: X3D-benchmarking input.i3dincompact3d: input.i3d 129 Cells Per Directionincompact3d: input.i3d 193 Cells Per Directionopenradioss: Bumper Beamopenradioss: Ford Taurus 10Mopenradioss: Chrysler Neon 1Mopenradioss: Cell Phone Drop Testopenradioss: Bird Strike on Windshieldopenradioss: Rubber O-Ring Seal Installationopenradioss: INIVOL and Fluid Structure Interaction Drop Containerrelion: Basic - CPUAMD EPYC 7402P 24-Core654.54826.182666.79826.67245.21.33338646332533102768.87031183627.7478817.75843974.65409310.1087020339.5189705113.3931918.04521.2858.45182.8698.45294.81901.772OpenBenchmarking.org

miniBUDE

MiniBUDE is a mini application for the the core computation of the Bristol University Docking Engine (BUDE). This test profile currently makes use of the OpenMP implementation of miniBUDE for CPU benchmarking. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgGFInst/s, More Is BetterminiBUDE 20210901Implementation: OpenMP - Input Deck: BM1AMD EPYC 7402P 24-Core140280420560700SE +/- 0.68, N = 3654.551. (CC) gcc options: -std=c99 -Ofast -ffast-math -fopenmp -march=native -lm

OpenBenchmarking.orgBillion Interactions/s, More Is BetterminiBUDE 20210901Implementation: OpenMP - Input Deck: BM1AMD EPYC 7402P 24-Core612182430SE +/- 0.03, N = 326.181. (CC) gcc options: -std=c99 -Ofast -ffast-math -fopenmp -march=native -lm

OpenBenchmarking.orgGFInst/s, More Is BetterminiBUDE 20210901Implementation: OpenMP - Input Deck: BM2AMD EPYC 7402P 24-Core140280420560700SE +/- 1.42, N = 3666.801. (CC) gcc options: -std=c99 -Ofast -ffast-math -fopenmp -march=native -lm

OpenBenchmarking.orgBillion Interactions/s, More Is BetterminiBUDE 20210901Implementation: OpenMP - Input Deck: BM2AMD EPYC 7402P 24-Core612182430SE +/- 0.06, N = 326.671. (CC) gcc options: -std=c99 -Ofast -ffast-math -fopenmp -march=native -lm

CLOMP

CLOMP is the C version of the Livermore OpenMP benchmark developed to measure OpenMP overheads and other performance impacts due to threading in order to influence future system designs. This particular test profile configuration is currently set to look at the OpenMP static schedule speed-up across all available CPU cores using the recommended test configuration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSpeedup, More Is BetterCLOMP 1.2Static OMP SpeedupAMD EPYC 7402P 24-Core1020304050SE +/- 3.67, N = 1245.21. (CC) gcc options: -fopenmp -O3 -lm

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 AtomsAMD EPYC 7402P 24-Core0.30.60.91.21.5SE +/- 0.24961, N = 151.33338

Algebraic Multi-Grid Benchmark

AMG is a parallel algebraic multigrid solver for linear systems arising from problems on unstructured grids. The driver provided with AMG builds linear systems for various 3-dimensional problems. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgFigure Of Merit, More Is BetterAlgebraic Multi-Grid Benchmark 1.2AMD EPYC 7402P 24-Core140M280M420M560M700MSE +/- 1357994.34, N = 36463325331. (CC) gcc options: -lparcsr_ls -lparcsr_mv -lseq_mv -lIJ_mv -lkrylov -lHYPRE_utilities -lm -fopenmp -lmpi

FFTE

FFTE is a package by Daisuke Takahashi to compute Discrete Fourier Transforms of 1-, 2- and 3- dimensional sequences of length (2^p)*(3^q)*(5^r). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterFFTE 7.0N=256, 3D Complex FFT RoutineAMD EPYC 7402P 24-Core20K40K60K80K100KSE +/- 6855.65, N = 12102768.871. (F9X) gfortran options: -O3 -fomit-frame-pointer -fopenmp

Pennant

Pennant is an application focused on hydrodynamics on general unstructured meshes in 2D. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: sedovbigAMD EPYC 7402P 24-Core714212835SE +/- 0.33, N = 327.751. (CXX) g++ options: -fopenmp -lmpi_cxx -lmpi

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: leblancbigAMD EPYC 7402P 24-Core48121620SE +/- 0.06, N = 317.761. (CXX) g++ options: -fopenmp -lmpi_cxx -lmpi

Xcompact3d Incompact3d

Xcompact3d Incompact3d is a Fortran-MPI based, finite difference high-performance code for solving the incompressible Navier-Stokes equation and as many as you need scalar transport equations. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: X3D-benchmarking input.i3dAMD EPYC 7402P 24-Core2004006008001000SE +/- 2.42, N = 3974.651. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lm -lz

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 129 Cells Per DirectionAMD EPYC 7402P 24-Core3691215SE +/- 0.12, N = 1510.111. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lm -lz

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 193 Cells Per DirectionAMD EPYC 7402P 24-Core918273645SE +/- 0.16, N = 339.521. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -levent_core -levent_pthreads -lm -lz

OpenRadioss

OpenRadioss is an open-source AGPL-licensed finite element solver for dynamic event analysis OpenRadioss is based on Altair Radioss and open-sourced in 2022. This open-source finite element solver is benchmarked with various example models available from https://www.openradioss.org/models/ and https://github.com/OpenRadioss/ModelExchange/tree/main/Examples. This test is currently using a reference OpenRadioss binary build offered via GitHub. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Bumper BeamAMD EPYC 7402P 24-Core306090120150SE +/- 0.71, N = 3113.39

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Ford Taurus 10MAMD EPYC 7402P 24-Core7K14K21K28K35KSE +/- 43.06, N = 331918.04

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Chrysler Neon 1MAMD EPYC 7402P 24-Core110220330440550SE +/- 2.05, N = 3521.28

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Cell Phone Drop TestAMD EPYC 7402P 24-Core1326395265SE +/- 0.49, N = 1558.45

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Bird Strike on WindshieldAMD EPYC 7402P 24-Core4080120160200SE +/- 1.26, N = 3182.86

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: Rubber O-Ring Seal InstallationAMD EPYC 7402P 24-Core20406080100SE +/- 0.74, N = 1598.45

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenRadioss 2023.09.15Model: INIVOL and Fluid Structure Interaction Drop ContainerAMD EPYC 7402P 24-Core60120180240300SE +/- 2.22, N = 3294.81

RELION

RELION - REgularised LIkelihood OptimisatioN - is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy (cryo-EM). It is developed in the research group of Sjors Scheres at the MRC Laboratory of Molecular Biology. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterRELION 4.0.1Test: Basic - Device: CPUAMD EPYC 7402P 24-Core2004006008001000SE +/- 6.65, N = 3901.771. (CXX) g++ options: -fopenmp -std=c++11 -O3 -rdynamic -ldl -ltiff -lfftw3f -lfftw3 -lpng -ljpeg -lmpi_cxx -lmpi

AMD EPYC 7402P 24-Core

Processor: AMD EPYC 7402P 24-Core @ 2.80GHz (24 Cores / 48 Threads), Motherboard: Supermicro H11SSL-i v2.00 (2.1 BIOS), Chipset: AMD Starship/Matisse, Memory: 128GB, Disk: 1000GB Western Digital WDS100T2B0C-00PXH0 + 4 x 2048GB ADATA LEGEND 710 + 11756GB HUH721212AL5204 + 4GB USB DISK 2.0 + 3 x 3001GB Western Digital WD30EFRX-68E + 18000GB Seagate ST18000NM000J-2T + 2000GB CT2000BX500SSD1, Graphics: AMD Radeon RX 5600 OEM/5600 XT / 5700/5700, Audio: AMD Navi 10 HDMI Audio, Network: 4 x Intel X710 for 10GbE SFP+ + 2 x Intel I210

OS: Ubuntu 22.04, Kernel: 5.15.0-89-generic (x86_64), Desktop: GNOME Shell 42.9, Display Server: X Server 1.21.1.4, OpenCL: OpenCL 2.1 AMD-APP (3590.0), Vulkan: 1.3.238, Compiler: GCC 11.4.0, File-System: ext4, Screen Resolution: 1024x768

Kernel Notes: Transparent Huge Pages: madvise
Environment Notes: NVM_CD_FLAGS=
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x830107a
Python Notes: Python 3.10.12
Security Notes: gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT enabled with STIBP protection + spec_rstack_overflow: Mitigation of safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 8 December 2023 09:37 by user primus.