Xcompact3d Incompact3d

Xcompact3d Incompact3d is a Fortran-MPI based, finite difference high-performance code for solving the incompressible Navier-Stokes equation and as many as you need scalar transport equations.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark incompact3d.

Project Site

github.com

Test Created

17 September 2020

Last Updated

18 March 2021

Test Maintainer

Michael Larabel 

Test Type

Processor

Average Install Time

1 Minute

Average Run Time

30 Minutes, 15 Seconds

Test Dependencies

Fortran + OpenMPI + FFTW + C/C++ Compiler Toolchain

Accolades

5k+ Downloads

Supported Platforms

Public Result UploadsReported Installs*Test Completions*OpenBenchmarking.orgEventsXcompact3d Incompact3d Popularity Statisticspts/incompact3d2020.092020.102020.112020.122021.012021.022021.032021.042004006008001000
* Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
Data current as of Fri, 09 Apr 2021 08:25:14 GMT.
input.i3d 129 Cells Per Direction52.0%input.i3d 192 Cells Per Direction13.2%input.i3d 193 Cells Per Direction34.8%Input Option PopularityOpenBenchmarking.org

Revision History

pts/incompact3d-2.0.2   [View Source]   Thu, 18 Mar 2021 05:40:41 GMT
Use 193 option rather than 192.

pts/incompact3d-2.0.1   [View Source]   Wed, 17 Mar 2021 09:22:38 GMT
Add a 192 cell per direction option for HEDT systems.

pts/incompact3d-2.0.0   [View Source]   Wed, 17 Mar 2021 08:12:12 GMT
Update against Xcompact3D/Incompact3D from GitHub, use X3D-benchmarking input, add lower 129 cell option too. Per https://github.com/phoronix-test-suite/phoronix-test-suite/issues/512

pts/incompact3d-1.0.0   [View Source]   Thu, 17 Sep 2020 16:44:55 GMT
Add Incompact3D xcompact3d solver benchmark.

Suites Using This Test

Molecular Dynamics

Scientific Computing

MPI Benchmarks

HPC - High Performance Computing


Performance Metrics

Analyze Test Configuration:

Xcompact3d Incompact3d 2021-03-11

Input: input.i3d 129 Cells Per Direction

OpenBenchmarking.org metrics for this test profile configuration based on 302 public results since 17 March 2021 with the latest data as of 9 April 2021.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

Component
Percentile Rank
# Matching Public Results
Seconds (Average)
2 x AMD EPYC 7763 64-Core
100th
3
3
2 x Intel Xeon Platinum 8280
99th
6
4
AMD EPYC 7763 64-Core
97th
6
5
AMD EPYC 7702 64-Core
95th
3
6
AMD Ryzen Threadripper 3990X 64-Core
94th
7
9
AMD Ryzen Threadripper 3970X 32-Core
90th
10
10
AMD Ryzen Threadripper 3960X 24-Core
88th
3
13
Intel Xeon Gold 6226R
88th
3
14
AMD Ryzen Threadripper 2990WX 32-Core
86th
4
17 +/- 1
Intel Xeon Silver 4216
86th
3
17
AMD Ryzen Threadripper 2970WX 24-Core
84th
3
19 +/- 2
AMD EPYC 7551 32-Core
83rd
6
19
AMD Ryzen Threadripper 2950X 16-Core
81st
7
20
Intel Core i9-10980XE
78th
8
21
Mid-Tier
75th
> 32
AMD Ryzen 9 3900X 12-Core
73rd
6
33
AMD Ryzen 9 3900XT 12-Core
73rd
3
33
AMD Ryzen 9 5900X 12-Core
73rd
12
33 +/- 2
AMD Ryzen 9 3950X 16-Core
70th
3
33 +/- 1
Intel Core i9-11900K
69th
5
34
Intel Core i9-9900KS
66th
3
34
AMD Ryzen 9 5950X 16-Core
65th
11
35 +/- 1
AMD Ryzen 5 5600X 6-Core
59th
5
38 +/- 3
AMD Ryzen 7 5800X 8-Core
58th
10
38 +/- 1
Intel Core i9-9900K
57th
3
38
AMD Ryzen 5 3600XT 6-Core
54th
3
40
AMD Ryzen 7 3800XT 8-Core
52nd
4
40
Median
50th
40
AMD Ryzen 7 3700X 8-Core
50th
6
40
Intel Core i5-10600K
50th
5
40 +/- 4
Intel Core i9-10900K
50th
7
41 +/- 1
Intel Xeon E-2288G
44th
4
42
Intel Core i7-1065G7
44th
7
42 +/- 2
Intel Core i7-1165G7
44th
11
42
Intel Core i7-8086K
42nd
3
42
Intel Core i7-10700T
39th
9
43 +/- 1
Intel Core i7-8700K
37th
3
43
Intel Core i5-8400
37th
3
44
AMD Ryzen 7 2700 Eight-Core
34th
3
44
Intel Core i7-9750H
32nd
9
46 +/- 1
Intel Core i7-7740K
29th
3
47
AMD Ryzen 3 3300X 4-Core
28th
6
50 +/- 1
Intel Core i5-9400F
26th
7
52 +/- 1
Low-Tier
25th
> 52
Intel Core i3-8100
24th
3
54
AMD Ryzen 5 3400G
23rd
3
55
Intel Core i3-10100
22nd
4
57
Intel Xeon E3-1280 v5
21st
3
60
Intel Core i5-6500
20th
3
60
AMD Ryzen 5 4500U
18th
9
62 +/- 1
Intel Xeon E3-1235L v5
16th
4
67
Intel Xeon E3-1231 v3
13th
3
68
Intel Core i3-7100
12th
3
72
Intel Core i7-8565U
12th
8
72 +/- 1
Intel Core i7-8550U
8th
4
76
Intel Core i5-4670
8th
3
79
Intel Core i5-7600K
7th
3
95
Intel Core i7-5600U
5th
6
99
Intel Core i7-3770K
3rd
3
131
AMD Ryzen 3 3200U
3rd
3
133 +/- 8
Intel Core i3-4130
1st
3
150
ARMv8 Cortex-A72 4-Core
1st
3
385 +/- 7
OpenBenchmarking.orgDistribution Of Public Results - Input: input.i3d 129 Cells Per Direction299 Results Range From 2 To 391 Seconds22242628210212214216218220222224226228230232234236238240220406080100

Based on OpenBenchmarking.org data, the selected test / test configuration (Xcompact3d Incompact3d 2021-03-11 - Input: input.i3d 129 Cells Per Direction) has an average run-time of 3 minutes. By default this test profile is set to run at least 3 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkInput: input.i3d 129 Cells Per DirectionRun-Time48121620Min: 1 / Avg: 2.7 / Max: 13

Based on public OpenBenchmarking.org results, the selected test / test configuration has an average standard deviation of 0.8%.

OpenBenchmarking.orgPercent, Fewer Is BetterAverage Deviation Between RunsInput: input.i3d 129 Cells Per DirectionDeviation246810Min: 0 / Avg: 0.76 / Max: 5

Does It Scale Well With Increasing Cores?

No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

IntelAMDOpenBenchmarking.orgRelative Core Scaling To BaseXcompact3d Incompact3d CPU Core ScalingInput: input.i3d 129 Cells Per Direction468121632642.064.126.188.2410.3

Notable Instruction Set Usage

Notable instruction set extensions supported by this test, based on an automatic analysis by the Phoronix Test Suite / OpenBenchmarking.org analytics engine.

Instruction Set
Support
Instructions Detected
SSE2 (SSE2)
Used by default on supported hardware.
 
SUBSD CVTSI2SD DIVSD COMISD MOVAPD XORPD MULSD ADDSD CVTTSD2SI UCOMISD ANDPD SQRTSD CVTSD2SS CVTSS2SD MAXSD MINSD
Last automated analysis: 30 January 2021

This test profile binary relies on the shared libraries libmpi.so.40, libopen-rte.so.40, libopen-pal.so.40, libhwloc.so.15, libdl.so.2, libevent-2.1.so.7, libutil.so.1, libgfortran.so.5, libm.so.6, librt.so.1, libz.so.1, libquadmath.so.0, libpthread.so.0, libc.so.6, libudev.so.1.

Recent Test Results

OpenBenchmarking.org Results Compare

3 Systems - 189 Benchmark Results

AMD EPYC 7763 64-Core - Supermicro H12SSL-i v1.01 - AMD Starship

Ubuntu 20.04 - 5.12.0-051200rc6daily20210408-generic - GNOME Shell 3.36.4

3 Systems - 117 Benchmark Results

AMD EPYC 7702 64-Core - ASRockRack EPYCD8 - AMD Starship

Ubuntu 20.04 - 5.9.0-050900rc6daily20200921-generic - GNOME Shell 3.36.4

26 Systems - 438 Benchmark Results

AMD EPYC 7542 32-Core - ASRockRack EPYCD8 - AMD Starship

Ubuntu 20.04 - 5.11.0-051100rc6daily20210201-generic - GNOME Shell 3.36.4

3 Systems - 126 Benchmark Results

Intel Core i5-4670 - MSI B85M-P33 - Intel 4th Gen Core DRAM

Ubuntu 20.04 - 5.9.0-050900rc7daily20201002-generic - GNOME Shell 3.36.3

3 Systems - 157 Benchmark Results

Intel Core i7-8086K - ASUS PRIME Z370-A - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc8daily20201009-generic - GNOME Shell 3.36.4

3 Systems - 162 Benchmark Results

Intel Core i9-9900KS - ASUS PRIME Z390-A - Intel Cannon Lake PCH

Ubuntu 20.04 - 5.9.0-050900rc8daily20201005-generic - GNOME Shell 3.36.2

3 Systems - 104 Benchmark Results

AMD Ryzen 7 2700 Eight-Core - Gigabyte AB350N-Gaming WIFI-CF - AMD 17h

Ubuntu 19.10 - 5.9.0-050900rc7daily20201004-generic - GNOME Shell 3.34.1

25 Systems - 438 Benchmark Results

2 x AMD EPYC 7713 64-Core - AMD DAYTONA_X - AMD Starship

Ubuntu 20.04 - 5.11.0-051100rc6daily20210201-generic - GNOME Shell 3.36.4

4 Systems - 150 Benchmark Results

Intel Xeon E3-1235L v5 - ASRockRack C236M WS - Intel Xeon E3-1200 v5

Ubuntu 20.04 - 5.8.0-050800-generic - GNOME Shell 3.36.4

4 Systems - 179 Benchmark Results

AMD Ryzen 5 5600X 6-Core - ASRock X570 Taichi - AMD Starship

Ubuntu 20.04 - 5.10.13-051013-lowlatency - GNOME Shell 3.36.4

3 Systems - 90 Benchmark Results

Intel Core i5-7600K - Gigabyte Z270M-D3H-CF - Intel Xeon E3-1200 v6

Ubuntu 20.04 - 5.9.0-050900rc7daily20200928-generic - GNOME Shell 3.36.4

3 Systems - 25 Benchmark Results

Intel Core i9-9900K - ASRock Z390M Pro4 - Intel Cannon Lake PCH

Ubuntu 20.04 - 5.9.0-050900rc1daily20200819-generic - GNOME Shell 3.36.4

Most Popular Test Results

OpenBenchmarking.org Results Compare

4 Systems - 20 Benchmark Results

AMD Ryzen 5 5600X 6-Core - ASUS TUF GAMING B550M-PLUS - AMD Starship

Ubuntu 20.10 - 5.8.0-45-generic - GNOME Shell 3.38.1

4 Systems - 179 Benchmark Results

Intel Core i5-11600K - ASUS ROG MAXIMUS XIII HERO - Intel Device 43ef

Ubuntu 20.04 - 5.10.13-051013-lowlatency - GNOME Shell 3.36.4

3 Systems - 20 Benchmark Results

AMD Ryzen Threadripper 3970X 32-Core - ASUS ROG ZENITH II EXTREME - AMD Starship

Ubuntu 20.10 - 5.11.0-rc6-phx - GNOME Shell 3.38.1

3 Systems - 22 Benchmark Results

Intel Core i7-8700K - ASUS TUF Z370-PLUS GAMING - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc6daily20200923-generic - GNOME Shell 3.36.4

2 Systems - 95 Benchmark Results

2 x Intel Xeon Platinum 8280 - GIGABYTE MD61-SC2-00 v01000100 - Intel Sky Lake-E DMI3 Registers

Clear Linux OS 34420 - 5.10.19-1032.native - GNOME Shell 3.38.4

3 Systems - 15 Benchmark Results

AMD Ryzen Threadripper 2950X 16-Core - MSI MEG X399 CREATION - AMD 17h

Debian 10 - 5.8.1-050801-generic - GNOME Shell 3.30.2

4 Systems - 12 Benchmark Results

Intel Core i7-8550U - Dell 0H0VG3 - Intel Xeon E3-1200 v6

Ubuntu 20.10 - 5.8.0-44-generic - GNOME Shell 3.38.2

3 Systems - 25 Benchmark Results

Intel Core i9-9900K - ASRock Z390M Pro4 - Intel Cannon Lake PCH

Ubuntu 20.04 - 5.9.0-050900rc1daily20200819-generic - GNOME Shell 3.36.4

3 Systems - 29 Benchmark Results

AMD Ryzen 7 3700X 8-Core - Gigabyte A320M-S2H-CF - AMD Starship

Ubuntu 20.04 - 5.8.1-050801-generic - GNOME Shell 3.36.4

2 Systems - 29 Benchmark Results

AMD Ryzen 7 3800XT 8-Core - MSI X370 XPOWER GAMING TITANIUM - AMD Starship

Debian 10 - 4.19.0-14-amd64 - X Server 1.20.4

3 Systems - 52 Benchmark Results

Intel Xeon E3-1280 v5 - MSI Z170A SLI PLUS - Intel Xeon E3-1200 v5

Ubuntu 20.04 - 5.9.0-050900rc2daily20200826-generic - GNOME Shell 3.36.4

3 Systems - 10 Benchmark Results

AMD Ryzen 7 5800X 8-Core - ASRock X570 Pro4 - AMD Starship

Ubuntu 20.10 - 5.11.0-051100rc3daily20210116-generic - GNOME Shell 3.38.1
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