Xcompact3d Incompact3d

Xcompact3d Incompact3d is a Fortran-MPI based, finite difference high-performance code for solving the incompressible Navier-Stokes equation and as many as you need scalar transport equations.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark incompact3d.

Project Site

github.com

Test Created

17 September 2020

Last Updated

18 March 2021

Test Maintainer

Michael Larabel 

Test Type

Processor

Average Install Time

1 Minute, 4 Seconds

Average Run Time

27 Minutes, 47 Seconds

Test Dependencies

Fortran + OpenMPI + FFTW + C/C++ Compiler Toolchain

Accolades

10k+ Downloads

Supported Platforms


Public Result Uploads *Reported Installs **Reported Test Completions **Test Profile Page Views ***OpenBenchmarking.orgEventsXcompact3d Incompact3d Popularity Statisticspts/incompact3d2020.092020.112021.012021.032021.052021.072021.092021.112022.012022.032022.052022.072022.092022.112023.012023.032023.052023.072023.092023.112024.012024.032024.052K4K6K8K10K
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
*** Test profile page view reporting began March 2021.
Data updated weekly as of 15 June 2024.
input.i3d 129 Cells Per Direction36.1%input.i3d 193 Cells Per Direction38.9%X3D-benchmarking input.i3d25.0%Input Option PopularityOpenBenchmarking.org

Revision History

pts/incompact3d-2.0.2   [View Source]   Thu, 18 Mar 2021 05:40:41 GMT
Use 193 option rather than 192.

pts/incompact3d-2.0.1   [View Source]   Wed, 17 Mar 2021 09:22:38 GMT
Add a 192 cell per direction option for HEDT systems.

pts/incompact3d-2.0.0   [View Source]   Wed, 17 Mar 2021 08:12:12 GMT
Update against Xcompact3D/Incompact3D from GitHub, use X3D-benchmarking input, add lower 129 cell option too. Per https://github.com/phoronix-test-suite/phoronix-test-suite/issues/512

pts/incompact3d-1.0.0   [View Source]   Thu, 17 Sep 2020 16:44:55 GMT
Add Incompact3D xcompact3d solver benchmark.

Suites Using This Test

HPC - High Performance Computing

Molecular Dynamics

Scientific Computing

MPI Benchmarks


Performance Metrics

Analyze Test Configuration:

Xcompact3d Incompact3d 2021-03-11

Input: input.i3d 193 Cells Per Direction

OpenBenchmarking.org metrics for this test profile configuration based on 1,668 public results since 17 March 2021 with the latest data as of 28 May 2024.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

Component
Percentile Rank
# Compatible Public Results
Seconds (Average)
Mid-Tier
75th
> 11
67th
5
13 +/- 2
Median
50th
23
49th
16
23 +/- 3
43rd
21
27 +/- 3
43rd
32
27 +/- 2
43rd
17
27 +/- 2
32nd
18
51 +/- 2
Low-Tier
25th
> 71
24th
7
73 +/- 2
17th
14
119 +/- 1
13th
5
140 +/- 10
13th
4
141 +/- 7
11th
3
146 +/- 2
11th
4
146 +/- 1
11th
7
146 +/- 1
10th
3
150 +/- 1
9th
3
152 +/- 4
7th
3
160 +/- 1
5th
3
178 +/- 2
4th
4
187 +/- 2
4th
4
193 +/- 3
3rd
3
220 +/- 1
2nd
3
246 +/- 1
2nd
4
255 +/- 1
1st
3
267 +/- 1
1st
3
300 +/- 5
1st
3
338 +/- 4
1st
3
449 +/- 4
OpenBenchmarking.orgDistribution Of Public Results - Input: input.i3d 193 Cells Per Direction1668 Results Range From 3 To 1561 Seconds342811201591982372763153543934324715105495886276667057447838228619009399781017105610951134117312121251129013291368140714461485152415632004006008001000

Based on OpenBenchmarking.org data, the selected test / test configuration (Xcompact3d Incompact3d 2021-03-11 - Input: input.i3d 193 Cells Per Direction) has an average run-time of 4 minutes. By default this test profile is set to run at least 3 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkInput: input.i3d 193 Cells Per DirectionRun-Time714212835Min: 1 / Avg: 3.5 / Max: 32

Based on public OpenBenchmarking.org results, the selected test / test configuration has an average standard deviation of 0.4%.

OpenBenchmarking.orgPercent, Fewer Is BetterAverage Deviation Between RunsInput: input.i3d 193 Cells Per DirectionDeviation246810Min: 0 / Avg: 0.39 / Max: 3

Does It Scale Well With Increasing Cores?

Yes, based on the automated analysis of the collected public benchmark data, this test / test settings does generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

AMDIntelOpenBenchmarking.orgRelative Core Scaling To BaseXcompact3d Incompact3d CPU Core ScalingInput: input.i3d 193 Cells Per Direction46812162432486496128918273645

Notable Instruction Set Usage

Notable instruction set extensions supported by this test, based on an automatic analysis by the Phoronix Test Suite / OpenBenchmarking.org analytics engine.

Instruction Set
Support
Instructions Detected
SSE2 (SSE2)
Used by default on supported hardware.
 
CVTSI2SD MULSD ADDSD COMISD SUBSD DIVSD MOVAPD XORPD CVTTSD2SI ANDPD UCOMISD MINSD MOVDQU MAXSD SQRTSD CVTSD2SS CVTSS2SD CMPLESD ANDNPD ORPD MOVDQA
Last automated analysis: 17 January 2022

This test profile binary relies on the shared libraries libgfortran.so.5, libm.so.6, libc.so.6, libmpi.so.40, libopen-pal.so.40, libquadmath.so.0, libopen-rte.so.40, libhwloc.so.15, libz.so.1, libudev.so.1.

Tested CPU Architectures

This benchmark has been successfully tested on the below mentioned architectures. The CPU architectures listed is where successful OpenBenchmarking.org result uploads occurred, namely for helping to determine if a given test is compatible with various alternative CPU architectures.

CPU Architecture
Kernel Identifier
Verified On
Intel / AMD x86 64-bit
x86_64
(Many Processors)
ARMv8 64-bit
aarch64
ARMv8 Cortex-A72, ARMv8 Cortex-A72 4-Core, ARMv8 Neoverse-N1, ARMv8 Neoverse-N1 128-Core, ARMv8 Neoverse-N1 32-Core, ARMv8 Neoverse-N1 64-Core, ARMv8 Neoverse-N1 80-Core, ARMv8 Neoverse-V1, ARMv8 Neoverse-V1 64-Core, ARMv8 Neoverse-V2 72-Core, Ampere ARMv8 Neoverse-N1 128-Core, Ampere ARMv8 Neoverse-N1 160-Core, Ampere ARMv8 Neoverse-N1 256-Core, Ampere Altra ARMv8 Neoverse-N1 160-Core, Ampere Altra ARMv8 Neoverse-N1 80-Core, Ampere eMAG ARMv8 32-Core

Recent Test Results

OpenBenchmarking.org Results Compare

22 Systems - 263 Benchmark Results

2 x Intel Xeon Max 9468 - Quanta Cloud QuantaGrid D54Q-2U S6Q-MB-MPS - Intel Device 1bce

Ubuntu 24.04 - 6.9.0-060900rc3-generic - GCC 13.2.0

6 Systems - 87 Benchmark Results

2 x Intel Xeon Silver 4208 - Dell Precision 7920 Rack 0DY2X0 - Intel Sky Lake-E DMI3 Registers

Debian 11 - 5.10.0-28-amd64 - X Server

1 System - 3 Benchmark Results

2 x Intel Xeon E5-2697 v3 - Supermicro X10DAX v1.02 - Intel Xeon E7 v3

cachyos rolling - 6.9.0-1-cachyos-server-lto - KDE Plasma 6.0.4

1 System - 2 Benchmark Results

2 x Intel Xeon E5-2697 v3 - Supermicro X10DAX v1.02 - Intel Xeon E7 v3

cachyos rolling - 6.9.0-1-cachyos-server-lto - KDE Plasma 6.0.4

1 System - 4 Benchmark Results

2 x Intel Xeon E5-2697 v3 - Supermicro X10DAX v1.02 - Intel Xeon E7 v3

cachyos rolling - 6.9.0-1-cachyos-server-lto - KDE Plasma 6.0.4

1 System - 3 Benchmark Results

2 x Intel Xeon E5-2697 v3 - Supermicro X10DAX v1.02 - Intel Xeon E7 v3

cachyos rolling - 6.9.0-1-cachyos-server-lto - KDE Plasma 6.0.4

1 System - 2 Benchmark Results

2 x Intel Xeon E5-2697 v3 - Supermicro X10DAX v1.02 - Intel Xeon E7 v3

cachyos rolling - 6.9.0-1-cachyos-server-lto - KDE Plasma 6.0.4

1 System - 920 Benchmark Results

1 System - 926 Benchmark Results

Intel Core i5-14500 - ASUS PRIME Z790-P WIFI - Intel Raptor Lake-S PCH

Ubuntu 24.04 - 6.8.0-31-generic - GNOME Shell 46.0

1 System - 236 Benchmark Results

AMD Ryzen 9 7900 12-Core - ASRockRack 1U4LW-B650/2L2T B650D4U-2L2T/BCM - AMD Device 14d8

Ubuntu 24.04 - 6.8.0-31-generic - GNOME Shell 46.0

3 Systems - 13 Benchmark Results

Intel Xeon E E-2488 - Supermicro Super Server X13SCL-F v0123456789 - Intel Device 7a27

Ubuntu 22.04 - 6.2.0-26-generic - GNOME Shell 42.9

1 System - 91 Benchmark Results

2 x AMD EPYC 9684X 96-Core - AMD Titanite_4G - AMD Device 14a4

Ubuntu 24.04 - 6.8.0-11-generic - GNOME Shell 45.3

4 Systems - 125 Benchmark Results

2 x INTEL XEON PLATINUM 8592+ - Quanta Cloud QuantaGrid D54Q-2U S6Q-MB-MPS - Intel Device 1bce

Ubuntu 23.10 - 6.5.0-17-generic - GCC 13.2.0

3 Systems - 125 Benchmark Results

2 x INTEL XEON PLATINUM 8592+ - Quanta Cloud QuantaGrid D54Q-2U S6Q-MB-MPS - Intel Device 1bce

CentOS Stream 9 - 5.14.0-419.el9.x86_64 - GNOME Shell 40.10

1 System - 125 Benchmark Results

2 x INTEL XEON PLATINUM 8592+ - Quanta Cloud QuantaGrid D54Q-2U S6Q-MB-MPS - Intel Device 1bce

Ubuntu 23.10 - 6.5.0-17-generic - GCC 13.2.0

Most Popular Test Results

OpenBenchmarking.org Results Compare

3 Systems - 31 Benchmark Results

Intel Core i5-8400 - MSI Z370M MORTAR - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc7daily20200929-generic - GNOME Shell 3.36.4

4 Systems - 20 Benchmark Results

AMD Ryzen 5 5600X 6-Core - ASUS TUF GAMING B550M-PLUS - AMD Starship

Ubuntu 20.10 - 5.8.0-45-generic - GNOME Shell 3.38.1

3 Systems - 189 Benchmark Results

AMD EPYC 7763 64-Core - Supermicro H12SSL-i v1.01 - AMD Starship

Ubuntu 20.04 - 5.12.0-051200rc6daily20210408-generic - GNOME Shell 3.36.4

2 Systems - 101 Benchmark Results

2 x Intel Xeon Platinum 8380 - Intel M50CYP2SB2U - Intel Device 0998

openSUSE Tumbleweed 20220507 - 5.17.4-1-default - GCC 11.2.1 20220420 [revision 691af15031e00227ba6d5935c1d737026cda4129]

3 Systems - 22 Benchmark Results

Intel Core i7-8700K - ASUS TUF Z370-PLUS GAMING - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc6daily20200923-generic - GNOME Shell 3.36.4

3 Systems - 101 Benchmark Results

Intel Core i9-10980XE - ASRock X299 Steel Legend - Intel Sky Lake-E DMI3 Registers

Ubuntu 21.04 - 5.11.0-16-generic - GNOME Shell 3.38.4

3 Systems - 25 Benchmark Results

Intel Core i9-9900K - ASRock Z390M Pro4 - Intel Cannon Lake PCH

Ubuntu 20.04 - 5.9.0-050900rc1daily20200819-generic - GNOME Shell 3.36.4

13 Systems - 333 Benchmark Results

Intel Core i9-12900K - ASUS ROG STRIX Z690-E GAMING WIFI - Intel Device 7aa7

Ubuntu 22.04 - 6.0.0-060000rc1daily20220820-generic - GNOME Shell 42.2

3 Systems - 162 Benchmark Results

Intel Core i9-9900KS - ASUS PRIME Z390-A - Intel Cannon Lake PCH

Ubuntu 20.04 - 5.9.0-050900rc8daily20201005-generic - GNOME Shell 3.36.2

2 Systems - 95 Benchmark Results

2 x Intel Xeon Platinum 8280 - GIGABYTE MD61-SC2-00 v01000100 - Intel Sky Lake-E DMI3 Registers

Clear Linux OS 34420 - 5.10.19-1032.native - GNOME Shell 3.38.4

5 Systems - 94 Benchmark Results

ARMv8 Neoverse-V1 - Amazon EC2 c7g.4xlarge - Amazon Device 0200

Ubuntu 22.04 - 5.15.0-1004-aws - GCC 11.2.0

3 Systems - 117 Benchmark Results

AMD EPYC 7702 64-Core - ASRockRack EPYCD8 - AMD Starship

Ubuntu 20.04 - 5.9.0-050900rc6daily20200921-generic - GNOME Shell 3.36.4

3 Systems - 52 Benchmark Results

Intel Xeon E3-1280 v5 - MSI Z170A SLI PLUS - Intel Xeon E3-1200 v5

Ubuntu 20.04 - 5.9.0-050900rc2daily20200826-generic - GNOME Shell 3.36.4

8 Systems - 188 Benchmark Results

2 x Intel Xeon Platinum 8380 - Intel M50CYP2SB2U - Intel Device 0998

Ubuntu 20.04 - 5.11.0-051100-generic - GNOME Shell 3.36.4

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