20210324-scicomp

Intel Core i7-5775C testing with a ASUS Z97I-PLUS (2704 BIOS) and ASUS Intel Iris Pro 6200 on Ubuntu 20.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2103253-HYDR-202103214&grs.

20210324-scicompProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelOpenCLCompilerFile-SystemScreen Resolutioni7 5775CIntel Core i7-5775C @ 3.70GHz (4 Cores / 8 Threads)ASUS Z97I-PLUS (2704 BIOS)Intel Broadwell-U DMI8GB128GB FCCT128M4SSD1ASUS Intel Iris Pro 6200 (1150MHz)Intel Broadwell-U AudioiScan DuoIntel I218-VUbuntu 20.045.4.0-67-generic (x86_64)OpenCL 2.0 beignet 1.3GCC 9.3.0ext41920x1080OpenBenchmarking.org- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate performance - CPU Microcode: 0x22 - Thermald 1.9.1 - Python 3.8.5- itlb_multihit: KVM: Vulnerable + l1tf: Mitigation of PTE Inversion; VMX: vulnerable + mds: Vulnerable; SMT vulnerable + meltdown: Vulnerable + spec_store_bypass: Vulnerable + spectre_v1: Vulnerable: __user pointer sanitization and usercopy barriers only; no swapgs barriers + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled + srbds: Vulnerable + tsx_async_abort: Vulnerable

20210324-scicompkripke: gpaw: Carbon Nanotubeoctave-benchmark: gromacs: water_GMX50_barehimeno: Poisson Pressure Solvermt-dgemm: Sustained Floating-Point Ratearrayfire: BLAS CPUlulesh: lammps: Rhodopsin Proteinlammps: 20k Atomsopenfoam: Motorbike 60Mopenfoam: Motorbike 30Mmocassin: Dust 2D tau100.0incompact3d: input.i3d 193 Cells Per Directionincompact3d: input.i3d 129 Cells Per Directionhmmer: Pfam Database Searchqmcpack: simple-H2Onwchem: C240 Buckyballmrbayes: Primate Phylogeny Analysispennant: leblancbigpennant: sedovbigfftw: Float + SSE - 2D FFT Size 4096fftw: Float + SSE - 1D FFT Size 4096fftw: Float + SSE - 2D FFT Size 32fftw: Float + SSE - 1D FFT Size 32fftw: Stock - 2D FFT Size 4096fftw: Stock - 1D FFT Size 4096fftw: Stock - 2D FFT Size 32fftw: Stock - 1D FFT Size 32ffte: N=256, 1D Complex FFT Routineamg: neat: dolfyn: Computational Fluid Dynamicsnamd: ATPase Simulation - 327,506 Atomscp2k: Fayalite-FIST Datacloverleaf: Lagrangian-Eulerian Hydrodynamicsminife: Smallmafft: Multiple Sequence Alignment - LSU RNAi7 5775C52740977318.5237.9760.4803650.0292111.755373402.4061167.20302.8412.8671464.89224.84287183.62086544.7731272110.28434.38120813.594.21196.18876162.4492190593538436881129644291.75644.06813.26718.220225.513494387177361867489.72022.2314.081951218.13120.573539.1931.035OpenBenchmarking.org

Kripke

OpenBenchmarking.orgThroughput FoM, More Is BetterKripke 1.2.4i7 5775C1.1M2.2M3.3M4.4M5.5MSE +/- 8241.32, N = 352740971. (CXX) g++ options: -O3 -fopenmp

GPAW

Input: Carbon Nanotube

OpenBenchmarking.orgSeconds, Fewer Is BetterGPAW 20.1Input: Carbon Nanotubei7 5775C16003200480064008000SE +/- 55.62, N = 37318.521. (CC) gcc options: -pthread -shared -fwrapv -O2 -lxc -lblas -lmpi

GNU Octave Benchmark

OpenBenchmarking.orgSeconds, Fewer Is BetterGNU Octave Benchmark 5.2.0i7 5775C246810SE +/- 0.027, N = 57.976

GROMACS

Input: water_GMX50_bare

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2021Input: water_GMX50_barei7 5775C0.1080.2160.3240.4320.54SE +/- 0.002, N = 30.4801. (CXX) g++ options: -O3 -pthread

Himeno Benchmark

Poisson Pressure Solver

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solveri7 5775C8001600240032004000SE +/- 5.22, N = 33650.031. (CC) gcc options: -O3 -mavx2

ACES DGEMM

Sustained Floating-Point Rate

OpenBenchmarking.orgGFLOP/s, More Is BetterACES DGEMM 1.0Sustained Floating-Point Ratei7 5775C0.3950.791.1851.581.975SE +/- 0.019679, N = 31.7553731. (CC) gcc options: -O3 -march=native -fopenmp

ArrayFire

Test: BLAS CPU

OpenBenchmarking.orgGFLOPS, More Is BetterArrayFire 3.7Test: BLAS CPUi7 5775C90180270360450SE +/- 0.07, N = 3402.411. (CXX) g++ options: -rdynamic

LULESH

OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.3i7 5775C30060090012001500SE +/- 0.19, N = 31167.201. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi

LAMMPS Molecular Dynamics Simulator

Model: Rhodopsin Protein

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Proteini7 5775C0.63921.27841.91762.55683.196SE +/- 0.004, N = 32.8411. (CXX) g++ options: -O3 -pthread -lm

LAMMPS Molecular Dynamics Simulator

Model: 20k Atoms

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atomsi7 5775C0.64511.29021.93532.58043.2255SE +/- 0.008, N = 32.8671. (CXX) g++ options: -O3 -pthread -lm

OpenFOAM

Input: Motorbike 60M

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 60Mi7 5775C30060090012001500SE +/- 0.98, N = 31464.891. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lspecie -lfiniteVolume -lfvOptions -lgenericPatchFields -lmeshTools -lsampling -lOpenFOAM -ldl -lm

OpenFOAM

Input: Motorbike 30M

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 8Input: Motorbike 30Mi7 5775C50100150200250SE +/- 2.67, N = 12224.841. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lspecie -lfiniteVolume -lfvOptions -lgenericPatchFields -lmeshTools -lsampling -lOpenFOAM -ldl -lm

Monte Carlo Simulations of Ionised Nebulae

Input: Dust 2D tau100.0

OpenBenchmarking.orgSeconds, Fewer Is BetterMonte Carlo Simulations of Ionised Nebulae 2019-03-24Input: Dust 2D tau100.0i7 5775C601201802403002871. (F9X) gfortran options: -cpp -Jsource/ -ffree-line-length-0 -lm -std=legacy -O3 -O2 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

Xcompact3d Incompact3d

Input: input.i3d 193 Cells Per Direction

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 193 Cells Per Directioni7 5775C4080120160200SE +/- 0.06, N = 3183.621. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

Xcompact3d Incompact3d

Input: input.i3d 129 Cells Per Direction

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 129 Cells Per Directioni7 5775C1020304050SE +/- 0.04, N = 344.771. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database Searchi7 5775C20406080100SE +/- 0.13, N = 3110.281. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm

QMCPACK

Input: simple-H2O

OpenBenchmarking.orgTotal Execution Time - Seconds, Fewer Is BetterQMCPACK 3.10Input: simple-H2Oi7 5775C816243240SE +/- 0.07, N = 334.381. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm

NWChem

Input: C240 Buckyball

OpenBenchmarking.orgSeconds, Fewer Is BetterNWChem 7.0.2Input: C240 Buckyballi7 5775C4K8K12K16K20K20813.51. (F9X) gfortran options: -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lsolvation -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -ltce -lbq -lmm -lcons -lperfm -ldntmc -lccca -ldimqm -lga -larmci -lpeigs -l64to32 -lopenblas -lpthread -lrt -llapack -lnwcblas -lmpi_usempif08 -lmpi_mpifh -lmpi -lcomex -lm -m64 -ffast-math -std=legacy -fdefault-integer-8 -finline-functions -O2

Timed MrBayes Analysis

Primate Phylogeny Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.2.7Primate Phylogeny Analysisi7 5775C20406080100SE +/- 0.11, N = 394.211. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm

Pennant

Test: leblancbig

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: leblancbigi7 5775C20406080100SE +/- 0.08, N = 396.191. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

Pennant

Test: sedovbig

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: sedovbigi7 5775C4080120160200SE +/- 0.06, N = 3162.451. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

FFTW

Build: Float + SSE - Size: 2D FFT Size 4096

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 4096i7 5775C4K8K12K16K20KSE +/- 297.70, N = 9190591. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Float + SSE - Size: 1D FFT Size 4096

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 4096i7 5775C8K16K24K32K40KSE +/- 275.59, N = 3353841. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Float + SSE - Size: 2D FFT Size 32

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 2D FFT Size 32i7 5775C8K16K24K32K40KSE +/- 200.44, N = 3368811. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Float + SSE - Size: 1D FFT Size 32

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Float + SSE - Size: 1D FFT Size 32i7 5775C3K6K9K12K15KSE +/- 37.55, N = 3129641. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Stock - Size: 2D FFT Size 4096

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 4096i7 5775C9001800270036004500SE +/- 37.06, N = 34291.71. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Stock - Size: 1D FFT Size 4096

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 4096i7 5775C12002400360048006000SE +/- 17.05, N = 35644.01. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Stock - Size: 2D FFT Size 32

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 2D FFT Size 32i7 5775C15003000450060007500SE +/- 4.02, N = 36813.21. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTW

Build: Stock - Size: 1D FFT Size 32

OpenBenchmarking.orgMflops, More Is BetterFFTW 3.3.6Build: Stock - Size: 1D FFT Size 32i7 5775C14002800420056007000SE +/- 0.00, N = 36718.21. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm

FFTE

Test: N=256, 1D Complex FFT Routine

OpenBenchmarking.orgMFLOPS, More Is BetterFFTE 7.0Test: N=256, 1D Complex FFT Routinei7 5775C4K8K12K16K20KSE +/- 43.14, N = 320225.511. (F9X) gfortran options: -O3 -fomit-frame-pointer -fopenmp

Algebraic Multi-Grid Benchmark

OpenBenchmarking.orgFigure Of Merit, More Is BetterAlgebraic Multi-Grid Benchmark 1.2i7 5775C40M80M120M160M200MSE +/- 283940.41, N = 31773618671. (CC) gcc options: -lparcsr_ls -lparcsr_mv -lseq_mv -lIJ_mv -lkrylov -lHYPRE_utilities -lm -fopenmp -pthread -lmpi

Nebular Empirical Analysis Tool

OpenBenchmarking.orgSeconds, Fewer Is BetterNebular Empirical Analysis Tool 2020-02-29i7 5775C110220330440550SE +/- 1.59, N = 3489.721. (F9X) gfortran options: -cpp -ffree-line-length-0 -Jsource/ -fopenmp -O3 -fno-backtrace

Dolfyn

Computational Fluid Dynamics

OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamicsi7 5775C510152025SE +/- 0.02, N = 322.23

NAMD

ATPase Simulation - 327,506 Atoms

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atomsi7 5775C0.91841.83682.75523.67364.592SE +/- 0.00248, N = 34.08195

CP2K Molecular Dynamics

Fayalite-FIST Data

OpenBenchmarking.orgSeconds, Fewer Is BetterCP2K Molecular Dynamics 8.1Fayalite-FIST Datai7 5775C300600900120015001218.13

CloverLeaf

Lagrangian-Eulerian Hydrodynamics

OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamicsi7 5775C306090120150SE +/- 0.80, N = 3120.571. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp

miniFE

Problem Size: Small

OpenBenchmarking.orgCG Mflops, More Is BetterminiFE 2.2Problem Size: Smalli7 5775C8001600240032004000SE +/- 4.75, N = 33539.191. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi

Timed MAFFT Alignment

Multiple Sequence Alignment - LSU RNA

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNAi7 5775C714212835SE +/- 0.89, N = 1531.041. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Phoronix Test Suite v10.8.4