maroc-desktop

maroc-desktop

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Bioinformatics 2 Tests
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maroc-desktop
February 07 2013
 
Furuta_DESK
February 08 2013
 
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maroc-desktopProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionOpenGLmaroc-desktopFuruta_DESKIntel Core i5 650 @ 3.19GHz (4 Cores)Dell 0D441TIntel Core DRAM8192MB250GB Western Digital WD2500AAJS-7Intel Core IGPRealtek ALC269VBSyncMasterIntel 82578DM Gigabit ConnectionUbuntu 12.043.2.0-37-generic-pae (i686)Unity 5.18.0X Server 1.11.3intel 2.17.0GCC 4.6ext41280x1024Intel Core i3-3110M @ 2.39GHz (4 Cores)Dell 013M3WIntel 3rd Gen Core DRAM500GB Seagate ST9500423ASIntel Gen7 Mobile (1000MHz)Conexant CX20590Atheros AR8161 Gigabit + Atheros AR9485 WirelessFedora 18 (Spherical Cow)3.6.10-4.fc18.x86_64 (x86_64)GNOME Shell 3.6.2X Server 1.13.0intel 2.20.142.1 Mesa 9.0.1GCC 4.7.2 201211091366x768OpenBenchmarking.orgDisk Details- maroc-desktop: CFQ / barrier=1,data=ordered,errors=remount-ro,relatime,rw,user_xattrProcessor Details- maroc-desktop: Scaling Governor: ondemandSystem Details- maroc-desktop: Disk Scheduler: CFQ. Python 2.7.3. Compiz was running on this system.- Furuta_DESK: Python 2.7.3. Firefox was running on this system. SELinux: Enabled.Compiler Details- Furuta_DESK: --build=x86_64-redhat-linux --disable-build-poststage1-with-cxx --disable-build-with-cxx --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-initfini-array --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-libgcj-multifile --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-linker-hash-style=gnu --with-ppl --with-tune=generic Disk Mount Options Details- Furuta_DESK: data=ordered,relatime,rw,seclabel

maroc-desktop vs. Furuta_DESK ComparisonPhoronix Test SuiteBaseline+686%+686%+1372%+1372%+2058%+2058%2743.8%106.1%63.7%31.7%31.6%15.9%15.8%7.3%5.8%4.4%3.6%3.6%D.T.PTotal TimeTotal TimeT.F.A.T.T57%Total Time49.3%2.F.C12 ClientsM.S.AH.2.H.T.N.DG.I.I.S12.7%Solitaire11.5%R.T.P.I.C8.2%P.D.SHWB Color Space2.F.C12,500 INSERTsL.A.TWAV To MP32.6%T.B.T.P.S2.3%PostMarkGMPbenchC-RayPyBenchPOV-RayLZMA CompressionDbenchTimed MAFFT AlignmentFFmpegSunflow Rendering SystemMiniondcrawTimed HMMer SearchGraphicsMagickParallel BZIP2 CompressionSQLiteGraphicsMagickLAME MP3 EncodingPostgreSQL pgbenchmaroc-desktopFuruta_DESK

maroc-desktoptiobench: 64MB Write - 32 Threadstiobench: 64MB Read - 32 Threadscrafty: Elapsed Timeminion: Solitaireencode-mp3: WAV To MP3dcraw: RAW To PPM Image Conversiondbench: 12 Clientshmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentsunflow: Global Illumination + Image Synthesispostmark: Disk Transaction Performancenero2d: Total Timecompress-lzma: 256MB File Compressioncompress-pbzip2: 256MB File Compressiongraphics-magick: HWB Color Spacegraphics-magick: Local Adaptive Thresholdingtachyon: Total Timec-ray: Total Timepovray: Total Timeffmpeg: H.264 HD To NTSC DVopenssl: RSA 4096-bit Performancesqlite: 12,500 INSERTspgbench: TPC-B Transactions Per Secondgmpbench: Total Timesudokut: Total Timepybench: Total For Average Test Timesmaroc-desktopFuruta_DESK42.577118.720.01111.8720.7678.9832.1632.1016.227.54121654.15218.2126.361045534.75168.5667926.5924.601318.12166.821054.7031.942501124.7821.3085.4342.3129.9313.998.503441165.6625.2511057102.97101422.961271.73163.102174.2031.443926OpenBenchmarking.org

Threaded I/O Tester

OpenBenchmarking.orgMB/s, More Is BetterThreaded I/O Tester 0.3.364MB Write - 32 Threadsmaroc-desktop1020304050SE +/- 0.12, N = 442.57

OpenBenchmarking.orgMB/s, More Is BetterThreaded I/O Tester 0.3.364MB Read - 32 Threadsmaroc-desktop15003000450060007500SE +/- 23.47, N = 47118.72

Crafty

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timemaroc-desktop0.00230.00460.00690.00920.0115SE +/- 0.00, N = 20.011. (CC) gcc options: -lstdc++ -lm

Minion

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.15Solitairemaroc-desktopFuruta_DESK306090120150SE +/- 0.05, N = 3SE +/- 1.52, N = 3111.87124.781. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 0.15Solitairemaroc-desktopFuruta_DESK20406080100Min: 111.78 / Avg: 111.87 / Max: 111.96Min: 121.79 / Avg: 124.78 / Max: 126.711. (CXX) g++ options: -O3 -fomit-frame-pointer -rdynamic -lboost_iostreams-mt -lz -lbz2

LAME MP3 Encoding

LAME is an MP3 encoder licensed under the LGPL. This test measures the time required to encode a WAV file to MP3 format. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterLAME MP3 Encoding 3.99.3WAV To MP3maroc-desktopFuruta_DESK510152025SE +/- 0.01, N = 5SE +/- 0.03, N = 520.7621.30
OpenBenchmarking.orgSeconds, Fewer Is BetterLAME MP3 Encoding 3.99.3WAV To MP3maroc-desktopFuruta_DESK510152025Min: 20.75 / Avg: 20.76 / Max: 20.8Min: 21.22 / Avg: 21.3 / Max: 21.4

dcraw

This test times how long it takes to convert several high-resolution RAW NEF image files to PPM image format using dcraw. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image Conversionmaroc-desktopFuruta_DESK20406080100SE +/- 0.67, N = 3SE +/- 0.22, N = 378.9885.431. (CC) gcc options: -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image Conversionmaroc-desktopFuruta_DESK1632486480Min: 78.28 / Avg: 78.98 / Max: 80.33Min: 85.02 / Avg: 85.43 / Max: 85.771. (CC) gcc options: -lm

Dbench

Dbench is a benchmark designed by the Samba project as a free alternative to netbench, but dbench contains only file-system calls for testing the disk performance. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMB/s, More Is BetterDbench 4.012 Clientsmaroc-desktopFuruta_DESK1020304050SE +/- 0.26, N = 3SE +/- 0.93, N = 632.1642.311. (CC) gcc options: -lpopt
OpenBenchmarking.orgMB/s, More Is BetterDbench 4.012 Clientsmaroc-desktopFuruta_DESK918273645Min: 31.89 / Avg: 32.16 / Max: 32.69Min: 38.39 / Avg: 42.31 / Max: 45.331. (CC) gcc options: -lpopt

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchmaroc-desktopFuruta_DESK714212835SE +/- 0.02, N = 3SE +/- 0.04, N = 332.1029.931. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchmaroc-desktopFuruta_DESK714212835Min: 32.08 / Avg: 32.1 / Max: 32.13Min: 29.86 / Avg: 29.93 / Max: 29.991. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentmaroc-desktopFuruta_DESK48121620SE +/- 0.24, N = 6SE +/- 0.22, N = 616.2213.991. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentmaroc-desktopFuruta_DESK48121620Min: 15.08 / Avg: 16.22 / Max: 16.67Min: 13.68 / Avg: 13.99 / Max: 15.051. (CC) gcc options: -O3 -lm -lpthread

Sunflow Rendering System

OpenBenchmarking.orgSeconds, Fewer Is BetterSunflow Rendering System 0.07.2Global Illumination + Image Synthesismaroc-desktopFuruta_DESK246810SE +/- 0.03, N = 2SE +/- 0.15, N = 27.548.50
OpenBenchmarking.orgSeconds, Fewer Is BetterSunflow Rendering System 0.07.2Global Illumination + Image Synthesismaroc-desktopFuruta_DESK3691215Min: 7.52 / Avg: 7.54 / Max: 7.57Min: 8.35 / Avg: 8.5 / Max: 8.65

PostMark

This is a test of NetApp's PostMark benchmark designed to simulate small-file testing similar to the tasks endured by web and mail servers. This test profile will set PostMark to perform 25,000 transactions with 500 files simultaneously with the file sizes ranging between 5 and 512 kilobytes. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction Performancemaroc-desktopFuruta_DESK7001400210028003500SE +/- 0.33, N = 3SE +/- 42.15, N = 312134411. (CC) gcc options: -O3
OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction Performancemaroc-desktopFuruta_DESK6001200180024003000Min: 121 / Avg: 121.33 / Max: 122Min: 3378 / Avg: 3441 / Max: 35211. (CC) gcc options: -O3

Open FMM Nero2D

OpenBenchmarking.orgSeconds, Fewer Is BetterOpen FMM Nero2D 2.0.2Total Timemaroc-desktop140280420560700654.151. (CXX) g++ options: -O2 -lfftw3 -llapack -lblas -lgfortran -lquadmath -lm

LZMA Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterLZMA Compression256MB File Compressionmaroc-desktopFuruta_DESK50100150200250SE +/- 0.11, N = 3SE +/- 0.09, N = 3218.21165.661. (CC) gcc options: -O2
OpenBenchmarking.orgSeconds, Fewer Is BetterLZMA Compression256MB File Compressionmaroc-desktopFuruta_DESK4080120160200Min: 218 / Avg: 218.21 / Max: 218.39Min: 165.48 / Avg: 165.66 / Max: 165.761. (CC) gcc options: -O2

Parallel BZIP2 Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.1.6256MB File Compressionmaroc-desktopFuruta_DESK612182430SE +/- 0.10, N = 3SE +/- 0.36, N = 326.3625.251. (CXX) g++ options: -O2 -pthread -lbz2 -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.1.6256MB File Compressionmaroc-desktopFuruta_DESK612182430Min: 26.2 / Avg: 26.36 / Max: 26.53Min: 24.57 / Avg: 25.25 / Max: 25.81. (CXX) g++ options: -O2 -pthread -lbz2 -lpthread

GraphicsMagick

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16HWB Color Spacemaroc-desktopFuruta_DESK20406080100SE +/- 0.33, N = 3SE +/- 0.58, N = 31041101. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lbz2 -lz -lm -lgomp -lpthread
OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16HWB Color Spacemaroc-desktopFuruta_DESK20406080100Min: 104 / Avg: 104.33 / Max: 105Min: 109 / Avg: 110 / Max: 1111. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lbz2 -lz -lm -lgomp -lpthread

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Local Adaptive Thresholdingmaroc-desktopFuruta_DESK1326395265SE +/- 0.00, N = 3SE +/- 0.00, N = 355571. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lbz2 -lz -lm -lgomp -lpthread
OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Local Adaptive Thresholdingmaroc-desktopFuruta_DESK1122334455Min: 55 / Avg: 55 / Max: 55Min: 57 / Avg: 57 / Max: 571. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lbz2 -lz -lm -lgomp -lpthread

Tachyon

This is a test of the threaded Tachyon, a parallel ray-tracing system. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTachyon 0.98.9Total Timemaroc-desktop816243240SE +/- 0.05, N = 334.751. (CC) gcc options: -m32 -O3 -fomit-frame-pointer -ffast-math -ltachyon -lm -lpthread

C-Ray

This is a test of C-Ray, a simple raytracer designed to test the floating-point CPU performance. This test is multi-threaded (16 threads per core), will shoot 8 rays per pixel for anti-aliasing, and will generate a 1600 x 1200 image. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timemaroc-desktopFuruta_DESK4080120160200SE +/- 1.18, N = 3SE +/- 0.03, N = 3168.56102.971. (CC) gcc options: -lm -lpthread -O3
OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timemaroc-desktopFuruta_DESK306090120150Min: 166.52 / Avg: 168.56 / Max: 170.59Min: 102.93 / Avg: 102.97 / Max: 103.031. (CC) gcc options: -lm -lpthread -O3

POV-Ray

OpenBenchmarking.orgSeconds, Fewer Is BetterPOV-Ray 3.6.1Total Timemaroc-desktopFuruta_DESK20040060080010006791014-march=i686 -mtune=i686-march=k8 -mtune=k81. (CXX) g++ options: -pipe -O3 -msse -mfpmath=sse -msse2 -malign-double -lz -lm

FFmpeg

OpenBenchmarking.orgSeconds, Fewer Is BetterFFmpeg 1.1H.264 HD To NTSC DVmaroc-desktopFuruta_DESK612182430SE +/- 0.08, N = 3SE +/- 0.24, N = 326.5922.961. (CC) gcc options: -lavdevice -lavfilter -lavformat -lavcodec -lswresample -lswscale -lavutil -ldl -lm -pthread -lbz2 -lrt
OpenBenchmarking.orgSeconds, Fewer Is BetterFFmpeg 1.1H.264 HD To NTSC DVmaroc-desktopFuruta_DESK612182430Min: 26.45 / Avg: 26.59 / Max: 26.73Min: 22.69 / Avg: 22.96 / Max: 23.431. (CC) gcc options: -lavdevice -lavfilter -lavformat -lavcodec -lswresample -lswscale -lavutil -ldl -lm -pthread -lbz2 -lrt

OpenSSL

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.1cRSA 4096-bit Performancemaroc-desktop612182430SE +/- 0.00, N = 324.601. (CC) gcc options: -O3 -fomit-frame-pointer -lssl -lcrypto -ldl

SQLite

OpenBenchmarking.orgSeconds, Fewer Is BetterSQLite 3.7.312,500 INSERTsmaroc-desktopFuruta_DESK30060090012001500SE +/- 11.92, N = 3SE +/- 4.45, N = 31318.121271.731. (CC) gcc options: -O2 -ldl -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterSQLite 3.7.312,500 INSERTsmaroc-desktopFuruta_DESK2004006008001000Min: 1294.48 / Avg: 1318.12 / Max: 1332.54Min: 1265.77 / Avg: 1271.73 / Max: 1280.431. (CC) gcc options: -O2 -ldl -lpthread

PostgreSQL pgbench

OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per Secondmaroc-desktopFuruta_DESK4080120160200SE +/- 1.02, N = 3SE +/- 3.58, N = 6166.82163.101. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm
OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per Secondmaroc-desktopFuruta_DESK306090120150Min: 164.85 / Avg: 166.82 / Max: 168.28Min: 145.82 / Avg: 163.1 / Max: 169.081. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm

GMPbench

OpenBenchmarking.orgGMPbench Score, More Is BetterGMPbench 0.2Total Timemaroc-desktopFuruta_DESK50010001500200025001054.702174.201. (CC) gcc options: -O3 -fomit-frame-pointer

Sudokut

This is a test of Sudokut, which is a Sudoku puzzle solver written in Tcl. This test measures how long it takes to solve 100 Sudoku puzzles. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total Timemaroc-desktopFuruta_DESK714212835SE +/- 0.01, N = 3SE +/- 0.05, N = 331.9431.44
OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total Timemaroc-desktopFuruta_DESK714212835Min: 31.94 / Avg: 31.94 / Max: 31.96Min: 31.34 / Avg: 31.44 / Max: 31.51

PyBench

OpenBenchmarking.orgMilliseconds, Fewer Is BetterPyBench 2008-08-14Total For Average Test Timesmaroc-desktopFuruta_DESK8001600240032004000SE +/- 6.00, N = 3SE +/- 1.86, N = 325013926
OpenBenchmarking.orgMilliseconds, Fewer Is BetterPyBench 2008-08-14Total For Average Test Timesmaroc-desktopFuruta_DESK7001400210028003500Min: 2495 / Avg: 2501 / Max: 2513Min: 3922 / Avg: 3925.67 / Max: 3928