s76 compute hpc

AMD Ryzen Threadripper 7980X 64-Cores testing with a System76 Thelio Major (FA Z5 BIOS) and NAVI31 45GB on Pop 22.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2402165-PTS-S76COMPU72
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February 16
  45 Minutes
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February 16
  43 Minutes
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s76 compute hpcOpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen Threadripper 7980X 64-Cores @ 7.79GHz (64 Cores / 128 Threads)System76 Thelio Major (FA Z5 BIOS)AMD Device 14a44 x 32GB DRAM-4800MT/s Micron MTC20F1045S1RC48BA21000GB CT1000T700SSD5NAVI31 45GB (1760/1124MHz)AMD Device 14ccDELL P2415QAquantia Device 14c0 + Realtek RTL8125 2.5GbE + Intel Wi-Fi 6 AX210/AX211/AX411Pop 22.046.7.0-060700daily20240120-generic (x86_64)GNOME Shell 42.5X Server 1.21.1.44.6 Mesa 23.3.2-1pop0~1704238321~22.04~36f1d0e (LLVM 15.0.7 DRM 3.57)1.3.267GCC 11.4.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerOpenGLVulkanCompilerFile-SystemScreen ResolutionS76 Compute Hpc BenchmarksSystem Logs- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: amd-pstate-epp powersave (EPP: balance_performance) - CPU Microcode: 0xa108105- Python 3.10.12- gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_rstack_overflow: Mitigation of Safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

sa vs. b ComparisonPhoronix Test SuiteBaseline+1.7%+1.7%+3.4%+3.4%+5.1%+5.1%+6.8%+6.8%6.9%3.2%3.1%3.2%3.1%6.9%CaffeNet 12-int8 - CPU - ParallelF.R.C.R.5.F.i - CPU - Standard3.5%GPT-2 - CPU - Standardbertsquad-12 - CPU - ParallelGPT-2 - CPU - Standardbertsquad-12 - CPU - ParallelCaffeNet 12-int8 - CPU - ParallelF.R.C.R.5.F.i - CPU - Standard3.5%ONNX RuntimeONNX RuntimeONNX RuntimeONNX RuntimeONNX RuntimeONNX RuntimeONNX RuntimeONNX Runtimesab

s76 compute hpcnamd: ATPase with 327,506 Atomsnamd: STMV with 1,066,628 Atomsoidn: RT.hdr_alb_nrm.3840x2160 - CPU-Onlyoidn: RT.ldr_alb_nrm.3840x2160 - CPU-Onlyoidn: RTLightmap.hdr.4096x4096 - CPU-Onlygromacs: MPI CPU - water_GMX50_bareonnx: GPT-2 - CPU - Parallelonnx: GPT-2 - CPU - Parallelonnx: GPT-2 - CPU - Standardonnx: GPT-2 - CPU - Standardonnx: yolov4 - CPU - Parallelonnx: yolov4 - CPU - Parallelonnx: yolov4 - CPU - Standardonnx: yolov4 - CPU - Standardonnx: T5 Encoder - CPU - Parallelonnx: T5 Encoder - CPU - Parallelonnx: T5 Encoder - CPU - Standardonnx: T5 Encoder - CPU - Standardonnx: bertsquad-12 - CPU - Parallelonnx: bertsquad-12 - CPU - Parallelonnx: bertsquad-12 - CPU - Standardonnx: bertsquad-12 - CPU - Standardonnx: CaffeNet 12-int8 - CPU - Parallelonnx: CaffeNet 12-int8 - CPU - Parallelonnx: CaffeNet 12-int8 - CPU - Standardonnx: CaffeNet 12-int8 - CPU - Standardonnx: fcn-resnet101-11 - CPU - Parallelonnx: fcn-resnet101-11 - CPU - Parallelonnx: fcn-resnet101-11 - CPU - Standardonnx: fcn-resnet101-11 - CPU - Standardonnx: ArcFace ResNet-100 - CPU - Parallelonnx: ArcFace ResNet-100 - CPU - Parallelonnx: ArcFace ResNet-100 - CPU - Standardonnx: ArcFace ResNet-100 - CPU - Standardonnx: ResNet50 v1-12-int8 - CPU - Parallelonnx: ResNet50 v1-12-int8 - CPU - Parallelonnx: ResNet50 v1-12-int8 - CPU - Standardonnx: ResNet50 v1-12-int8 - CPU - Standardonnx: super-resolution-10 - CPU - Parallelonnx: super-resolution-10 - CPU - Parallelonnx: super-resolution-10 - CPU - Standardonnx: super-resolution-10 - CPU - Standardonnx: Faster R-CNN R-50-FPN-int8 - CPU - Parallelonnx: Faster R-CNN R-50-FPN-int8 - CPU - Parallelonnx: Faster R-CNN R-50-FPN-int8 - CPU - Standardonnx: Faster R-CNN R-50-FPN-int8 - CPU - Standardsab6.487271.653892.212.221.057.572167.2245.97364104.8629.534255.39937185.29.72674102.806339.92.94058138.5557.216876.21189160.97813.310775.1213222.6124.4904445.4762.244072.21477451.515.74038174.20212.926177.359340.107424.930487.626911.4108206.0114.85344135.7637.3644498.364810.165930.737332.531644.517822.46126.519411.654292.212.221.057.561164.2126.08347108.2449.236225.3496186.9249.73582102.703342.3282.91968140.017.141886.40524156.11913.288475.2502237.8824.20204449.1982.225522.19799454.9565.75273173.82712.838477.889639.901425.059688.764311.2646205.7194.86018134.3577.4415698.33710.168830.395532.897142.992923.2576OpenBenchmarking.org

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0b6Input: ATPase with 327,506 Atomssab2468106.487276.51941

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0b6Input: STMV with 1,066,628 Atomssab0.37220.74441.11661.48881.8611.653891.65429

Intel Open Image Denoise

Open Image Denoise is a denoising library for ray-tracing and part of the Intel oneAPI rendering toolkit. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgImages / Sec, More Is BetterIntel Open Image Denoise 2.2Run: RT.hdr_alb_nrm.3840x2160 - Device: CPU-Onlysab0.49730.99461.49191.98922.48652.212.21

OpenBenchmarking.orgImages / Sec, More Is BetterIntel Open Image Denoise 2.2Run: RT.ldr_alb_nrm.3840x2160 - Device: CPU-Onlysab0.49950.9991.49851.9982.49752.222.22

OpenBenchmarking.orgImages / Sec, More Is BetterIntel Open Image Denoise 2.2Run: RTLightmap.hdr.4096x4096 - Device: CPU-Onlysab0.23630.47260.70890.94521.18151.051.05

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing with the water_GMX50 data. This test profile allows selecting between CPU and GPU-based GROMACS builds. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2024Implementation: MPI CPU - Input: water_GMX50_baresab2468107.5727.5611. (CXX) g++ options: -O3 -lm

ONNX Runtime

ONNX Runtime is developed by Microsoft and partners as a open-source, cross-platform, high performance machine learning inferencing and training accelerator. This test profile runs the ONNX Runtime with various models available from the ONNX Model Zoo. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: GPT-2 - Device: CPU - Executor: Parallelsab4080120160200167.22164.211. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: GPT-2 - Device: CPU - Executor: Standardsab20406080100104.86108.241. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: yolov4 - Device: CPU - Executor: Parallelsab1.21492.42983.64474.85966.07455.399375.349601. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: yolov4 - Device: CPU - Executor: Standardsab36912159.726749.735821. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: T5 Encoder - Device: CPU - Executor: Parallelsab70140210280350339.90342.331. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: T5 Encoder - Device: CPU - Executor: Standardsab306090120150138.56140.011. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: bertsquad-12 - Device: CPU - Executor: Parallelsab2468106.211896.405241. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: bertsquad-12 - Device: CPU - Executor: Standardsab369121513.3113.291. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: CaffeNet 12-int8 - Device: CPU - Executor: Parallelsab50100150200250222.61237.881. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: CaffeNet 12-int8 - Device: CPU - Executor: Standardsab100200300400500445.48449.201. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: fcn-resnet101-11 - Device: CPU - Executor: Parallelsab0.49830.99661.49491.99322.49152.214772.197991. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: fcn-resnet101-11 - Device: CPU - Executor: Standardsab1.29442.58883.88325.17766.4725.740385.752731. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: ArcFace ResNet-100 - Device: CPU - Executor: Parallelsab369121512.9312.841. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: ArcFace ResNet-100 - Device: CPU - Executor: Standardsab91827364540.1139.901. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: ResNet50 v1-12-int8 - Device: CPU - Executor: Parallelsab2040608010087.6388.761. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: ResNet50 v1-12-int8 - Device: CPU - Executor: Standardsab50100150200250206.01205.721. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: super-resolution-10 - Device: CPU - Executor: Parallelsab306090120150135.76134.361. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: super-resolution-10 - Device: CPU - Executor: Standardsab2040608010098.3698.341. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: Faster R-CNN R-50-FPN-int8 - Device: CPU - Executor: Parallelsab71421283530.7430.401. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt

OpenBenchmarking.orgInferences Per Second, More Is BetterONNX Runtime 1.17Model: Faster R-CNN R-50-FPN-int8 - Device: CPU - Executor: Standardsab102030405044.5242.991. (CXX) g++ options: -O3 -march=native -ffunction-sections -fdata-sections -mtune=native -flto=auto -fno-fat-lto-objects -ldl -lrt