ryzen 9 5900x compute AMD Ryzen 9 5900X 12-Core testing with a ASUS ROG CROSSHAIR VIII HERO (3202 BIOS) and Sapphire AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 6GB on Ubuntu 20.10 via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2101248-HA-RYZEN959065&grt&sor .
ryzen 9 5900x compute Processor Motherboard Chipset Memory Disk Graphics Audio Monitor Network OS Kernel Desktop Display Server Display Driver OpenGL Vulkan Compiler File-System Screen Resolution 1 2 3 AMD Ryzen 9 5900X 12-Core @ 3.70GHz (12 Cores / 24 Threads) ASUS ROG CROSSHAIR VIII HERO (3202 BIOS) AMD Starship/Matisse 16GB 1000GB Samsung SSD 980 PRO 1TB Sapphire AMD Radeon RX 5600 OEM/5600 XT / 5700/5700 6GB (1780/875MHz) AMD Navi 10 HDMI Audio ASUS VP28U Realtek RTL8125 2.5GbE + Intel I211 Ubuntu 20.10 5.8.0-38-generic (x86_64) GNOME Shell 3.38.1 X Server 1.20.9 modesetting 1.20.9 4.6 Mesa 20.2.1 (LLVM 11.0.0) 1.2.131 GCC 10.2.0 ext4 3840x2160 OpenBenchmarking.org Kernel Details - Transparent Huge Pages: madvise Compiler Details - --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-gcn/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details - Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0xa201009 Python Details - 1: Python 3.8.6 Security Details - itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: always-on RSB filling + srbds: Not affected + tsx_async_abort: Not affected
ryzen 9 5900x compute cloverleaf: Lagrangian-Eulerian Hydrodynamics cp2k: Fayalite-FIST Data dolfyn: Computational Fluid Dynamics gromacs: Water Benchmark himeno: Poisson Pressure Solver incompact3d: Cylinder lammps: 20k Atoms lammps: Rhodopsin Protein lulesh: minife: Small namd: ATPase Simulation - 327,506 Atoms npb: EP.C npb: EP.D npb: LU.C nwchem: C240 Buckyball openfoam: Motorbike 30M openfoam: Motorbike 60M pennant: sedovbig pennant: leblancbig qmcpack: simple-H2O qe: AUSURF112 rodinia: OpenMP LavaMD rodinia: OpenMP HotSpot3D rodinia: OpenMP Leukocyte rodinia: OpenMP CFD Solver rodinia: OpenMP Streamcluster hmmer: Pfam Database Search mafft: Multiple Sequence Alignment - LSU RNA mrbayes: Primate Phylogeny Analysis 1 2 3 125.73 779.646 13.439 1.257 5210.610211 227.760890 10.613 10.427 5197.4336 4290.68 1.29398 1477.46 1460.31 27079.43 11086 97.53 1273.46 2997.286 2871.307 21.255 1263.97 129.657 67.111 71.722 12.811 21.864 96.388 7.379 58.487 129.22 772.101 13.155 1.256 5245.240992 226.847718 10.552 10.604 5248.0915 4298.13 1.29027 1478.90 1465.57 27412.76 10958.2 98.15 1274.96 2997.151 2872.605 21.266 1261.63 129.805 67.630 71.574 12.811 21.810 96.555 7.493 58.441 129.12 764.575 13.447 4285.50 1.29520 1475.47 1458.77 27320.83 2999.999 129.632 62.020 71.648 12.790 21.822 OpenBenchmarking.org
CloverLeaf Lagrangian-Eulerian Hydrodynamics OpenBenchmarking.org Seconds, Fewer Is Better CloverLeaf Lagrangian-Eulerian Hydrodynamics 1 3 2 30 60 90 120 150 SE +/- 0.44, N = 3 SE +/- 0.24, N = 3 SE +/- 0.20, N = 3 125.73 129.12 129.22 1. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp
CP2K Molecular Dynamics Fayalite-FIST Data OpenBenchmarking.org Seconds, Fewer Is Better CP2K Molecular Dynamics 8.1 Fayalite-FIST Data 3 2 1 200 400 600 800 1000 764.58 772.10 779.65
Dolfyn Computational Fluid Dynamics OpenBenchmarking.org Seconds, Fewer Is Better Dolfyn 0.527 Computational Fluid Dynamics 2 1 3 3 6 9 12 15 SE +/- 0.05, N = 3 SE +/- 0.05, N = 3 SE +/- 0.16, N = 3 13.16 13.44 13.45
GROMACS Water Benchmark OpenBenchmarking.org Ns Per Day, More Is Better GROMACS 2020.3 Water Benchmark 1 2 0.2828 0.5656 0.8484 1.1312 1.414 SE +/- 0.000, N = 3 SE +/- 0.002, N = 3 1.257 1.256 1. (CXX) g++ options: -O3 -pthread -lrt -lpthread -lm
Himeno Benchmark Poisson Pressure Solver OpenBenchmarking.org MFLOPS, More Is Better Himeno Benchmark 3.0 Poisson Pressure Solver 2 1 1100 2200 3300 4400 5500 SE +/- 75.41, N = 15 SE +/- 79.28, N = 15 5245.24 5210.61 1. (CC) gcc options: -O3 -mavx2
Incompact3D Input: Cylinder OpenBenchmarking.org Seconds, Fewer Is Better Incompact3D 2020-09-17 Input: Cylinder 2 1 50 100 150 200 250 SE +/- 2.49, N = 4 SE +/- 2.70, N = 3 226.85 227.76 1. (F9X) gfortran options: -cpp -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz
LAMMPS Molecular Dynamics Simulator Model: 20k Atoms OpenBenchmarking.org ns/day, More Is Better LAMMPS Molecular Dynamics Simulator 29Oct2020 Model: 20k Atoms 1 2 3 6 9 12 15 SE +/- 0.06, N = 3 SE +/- 0.01, N = 3 10.61 10.55 1. (CXX) g++ options: -O3 -pthread -lm
LAMMPS Molecular Dynamics Simulator Model: Rhodopsin Protein OpenBenchmarking.org ns/day, More Is Better LAMMPS Molecular Dynamics Simulator 29Oct2020 Model: Rhodopsin Protein 2 1 3 6 9 12 15 SE +/- 0.12, N = 4 SE +/- 0.07, N = 15 10.60 10.43 1. (CXX) g++ options: -O3 -pthread -lm
LULESH OpenBenchmarking.org z/s, More Is Better LULESH 2.0.3 2 1 1100 2200 3300 4400 5500 SE +/- 25.04, N = 3 SE +/- 39.49, N = 3 5248.09 5197.43 1. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi
miniFE Problem Size: Small OpenBenchmarking.org CG Mflops, More Is Better miniFE 2.2 Problem Size: Small 2 1 3 900 1800 2700 3600 4500 SE +/- 0.62, N = 3 SE +/- 11.60, N = 3 SE +/- 11.25, N = 3 4298.13 4290.68 4285.50 1. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi
NAMD ATPase Simulation - 327,506 Atoms OpenBenchmarking.org days/ns, Fewer Is Better NAMD 2.14 ATPase Simulation - 327,506 Atoms 2 1 3 0.2914 0.5828 0.8742 1.1656 1.457 SE +/- 0.00110, N = 3 SE +/- 0.00369, N = 3 SE +/- 0.00373, N = 3 1.29027 1.29398 1.29520
NAS Parallel Benchmarks Test / Class: EP.C OpenBenchmarking.org Total Mop/s, More Is Better NAS Parallel Benchmarks 3.4 Test / Class: EP.C 2 1 3 300 600 900 1200 1500 SE +/- 3.50, N = 3 SE +/- 2.77, N = 3 SE +/- 3.14, N = 3 1478.90 1477.46 1475.47 1. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
NAS Parallel Benchmarks Test / Class: EP.D OpenBenchmarking.org Total Mop/s, More Is Better NAS Parallel Benchmarks 3.4 Test / Class: EP.D 2 1 3 300 600 900 1200 1500 SE +/- 3.58, N = 3 SE +/- 4.03, N = 3 SE +/- 10.15, N = 3 1465.57 1460.31 1458.77 1. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
NAS Parallel Benchmarks Test / Class: LU.C OpenBenchmarking.org Total Mop/s, More Is Better NAS Parallel Benchmarks 3.4 Test / Class: LU.C 2 3 1 6K 12K 18K 24K 30K SE +/- 29.40, N = 3 SE +/- 40.05, N = 3 SE +/- 51.45, N = 3 27412.76 27320.83 27079.43 1. (F9X) gfortran options: -O3 -march=native -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz 2. Open MPI 4.0.3
NWChem Input: C240 Buckyball OpenBenchmarking.org Seconds, Fewer Is Better NWChem 7.0 Input: C240 Buckyball 2 1 2K 4K 6K 8K 10K 10958.2 11086.0 1. (F9X) gfortran options: -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lsolvation -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -ltce -lbq -lmm -lcons -lperfm -ldntmc -lccca -ldimqm -lga -larmci -lpeigs -l64to32 -lopenblas -lpthread -lrt -llapack -lnwcblas -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lz -lcomex -m64 -ffast-math -std=legacy -fdefault-integer-8 -finline-functions -O2
OpenFOAM Input: Motorbike 30M OpenBenchmarking.org Seconds, Fewer Is Better OpenFOAM 8 Input: Motorbike 30M 1 2 20 40 60 80 100 SE +/- 0.11, N = 3 SE +/- 0.14, N = 3 97.53 98.15 1. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm
OpenFOAM Input: Motorbike 60M OpenBenchmarking.org Seconds, Fewer Is Better OpenFOAM 8 Input: Motorbike 60M 1 2 300 600 900 1200 1500 SE +/- 0.39, N = 3 SE +/- 0.48, N = 3 1273.46 1274.96 1. (CXX) g++ options: -std=c++11 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm
Pennant Test: sedovbig OpenBenchmarking.org Hydro Cycle Time - Seconds, Fewer Is Better Pennant 1.0.1 Test: sedovbig 2 1 3 600 1200 1800 2400 3000 SE +/- 0.44, N = 3 SE +/- 0.38, N = 3 SE +/- 0.58, N = 3 2997.15 2997.29 3000.00 1. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
Pennant Test: leblancbig OpenBenchmarking.org Hydro Cycle Time - Seconds, Fewer Is Better Pennant 1.0.1 Test: leblancbig 1 2 600 1200 1800 2400 3000 SE +/- 0.47, N = 3 SE +/- 0.51, N = 3 2871.31 2872.61 1. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
QMCPACK Input: simple-H2O OpenBenchmarking.org Total Execution Time - Seconds, Fewer Is Better QMCPACK 3.10 Input: simple-H2O 1 2 5 10 15 20 25 SE +/- 0.17, N = 3 SE +/- 0.12, N = 3 21.26 21.27 1. (CXX) g++ options: -fopenmp -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -fomit-frame-pointer -ffast-math -pthread -lm
Quantum ESPRESSO Input: AUSURF112 OpenBenchmarking.org Seconds, Fewer Is Better Quantum ESPRESSO 6.7 Input: AUSURF112 2 1 300 600 900 1200 1500 SE +/- 2.61, N = 3 SE +/- 1.65, N = 3 1261.63 1263.97 1. (F9X) gfortran options: -lopenblas -lFoX_dom -lFoX_sax -lFoX_wxml -lFoX_common -lFoX_utils -lFoX_fsys -lfftw3 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi -lopen-rte -lopen-pal -lhwloc -ldl -levent -levent_pthreads -lutil -lm -lrt -lz
Rodinia Test: OpenMP LavaMD OpenBenchmarking.org Seconds, Fewer Is Better Rodinia 3.1 Test: OpenMP LavaMD 3 1 2 30 60 90 120 150 SE +/- 0.05, N = 3 SE +/- 0.13, N = 3 SE +/- 0.06, N = 3 129.63 129.66 129.81 1. (CXX) g++ options: -O2 -lOpenCL
Rodinia Test: OpenMP HotSpot3D OpenBenchmarking.org Seconds, Fewer Is Better Rodinia 3.1 Test: OpenMP HotSpot3D 3 1 2 15 30 45 60 75 SE +/- 0.35, N = 3 SE +/- 1.56, N = 15 SE +/- 1.15, N = 15 62.02 67.11 67.63 1. (CXX) g++ options: -O2 -lOpenCL
Rodinia Test: OpenMP Leukocyte OpenBenchmarking.org Seconds, Fewer Is Better Rodinia 3.1 Test: OpenMP Leukocyte 2 3 1 16 32 48 64 80 SE +/- 0.20, N = 3 SE +/- 0.29, N = 3 SE +/- 0.32, N = 3 71.57 71.65 71.72 1. (CXX) g++ options: -O2 -lOpenCL
Rodinia Test: OpenMP CFD Solver OpenBenchmarking.org Seconds, Fewer Is Better Rodinia 3.1 Test: OpenMP CFD Solver 3 1 2 3 6 9 12 15 SE +/- 0.03, N = 3 SE +/- 0.03, N = 3 SE +/- 0.03, N = 3 12.79 12.81 12.81 1. (CXX) g++ options: -O2 -lOpenCL
Rodinia Test: OpenMP Streamcluster OpenBenchmarking.org Seconds, Fewer Is Better Rodinia 3.1 Test: OpenMP Streamcluster 2 3 1 5 10 15 20 25 SE +/- 0.02, N = 3 SE +/- 0.00, N = 3 SE +/- 0.16, N = 3 21.81 21.82 21.86 1. (CXX) g++ options: -O2 -lOpenCL
Timed HMMer Search Pfam Database Search OpenBenchmarking.org Seconds, Fewer Is Better Timed HMMer Search 3.3.1 Pfam Database Search 1 2 20 40 60 80 100 SE +/- 0.11, N = 3 SE +/- 0.07, N = 3 96.39 96.56 1. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm
Timed MAFFT Alignment Multiple Sequence Alignment - LSU RNA OpenBenchmarking.org Seconds, Fewer Is Better Timed MAFFT Alignment 7.471 Multiple Sequence Alignment - LSU RNA 1 2 2 4 6 8 10 SE +/- 0.062, N = 3 SE +/- 0.024, N = 3 7.379 7.493 1. (CC) gcc options: -std=c99 -O3 -lm -lpthread
Timed MrBayes Analysis Primate Phylogeny Analysis OpenBenchmarking.org Seconds, Fewer Is Better Timed MrBayes Analysis 3.2.7 Primate Phylogeny Analysis 2 1 13 26 39 52 65 SE +/- 0.15, N = 3 SE +/- 0.12, N = 3 58.44 58.49 1. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm
Phoronix Test Suite v10.8.4