performanceTestBio

Intel Core 2 Duo T7700 testing with a OpenStack Foundation Nova v2013.1.5 and Cirrus Logic GD 5446 on Ubuntu 12.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1406011-AR-PERFORMAN47
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Date
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  Duration
computaBio test suite
June 01 2014
 
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computaBio test suite

Processor: Intel Core 2 Duo T7700 @ 2.30GHz (2 Cores), Motherboard: OpenStack Foundation Nova v2013.1.5, Chipset: Red Hat Virtio, Memory: 1 x 16384 MB RAM, Disk: 10GB, Graphics: Cirrus Logic GD 5446, Network: Red Hat Virtio device

OS: Ubuntu 12.04, Kernel: 3.2.0-61-generic (x86_64), Desktop: Unity 2D 5.20.0, Display Server: X Server 1.11.3, Display Driver: cirrus 1.3.2, Compiler: GCC 4.6, File-System: ext4, Screen Resolution: 1024x768

performanceTestBioOpenBenchmarking.orgPhoronix Test SuiteIntel Core 2 Duo T7700 @ 2.30GHz (2 Cores)OpenStack Foundation Nova v2013.1.5Red Hat Virtio1 x 16384 MB RAM10GBCirrus Logic GD 5446Red Hat Virtio deviceUbuntu 12.043.2.0-61-generic (x86_64)Unity 2D 5.20.0X Server 1.11.3cirrus 1.3.2GCC 4.6ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionPerformanceTestBio BenchmarksSystem Logs

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchcomputaBio test suite816243240SE +/- 0.62, N = 336.80

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentcomputaBio test suite48121620SE +/- 0.10, N = 317.64

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysiscomputaBio test suite1428425670SE +/- 0.34, N = 361.07

computaBio test suite

Processor: Intel Core 2 Duo T7700 @ 2.30GHz (2 Cores), Motherboard: OpenStack Foundation Nova v2013.1.5, Chipset: Red Hat Virtio, Memory: 1 x 16384 MB RAM, Disk: 10GB, Graphics: Cirrus Logic GD 5446, Network: Red Hat Virtio device

OS: Ubuntu 12.04, Kernel: 3.2.0-61-generic (x86_64), Desktop: Unity 2D 5.20.0, Display Server: X Server 1.11.3, Display Driver: cirrus 1.3.2, Compiler: GCC 4.6, File-System: ext4, Screen Resolution: 1024x768

Testing initiated at 1 June 2014 11:58 by user root.