namd_test

2 x AMD EPYC 9534 64-Core testing with a Tyrone SDA20A2GM-818 (3.2 BIOS) and astdrmfb on AlmaLinux 9.4 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2412089-RAMB-NAMDTES98
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
first_run
December 08
  4 Minutes
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namd_testOpenBenchmarking.orgPhoronix Test Suite2 x AMD EPYC 9534 64-Core @ 2.45GHz (128 Cores / 256 Threads)Tyrone SDA20A2GM-818 (3.2 BIOS)1520GB8 x 3841GB Micron_7450_MTFDKCB3T8TFR + 480GB SAS 3808astdrmfb (2100/1300MHz)DELL E170SAlmaLinux 9.45.14.0-503.14.1.el9_5.x86_64 (x86_64)GCC 13.2.0nfs1280x1024ProcessorMotherboardMemoryDiskGraphicsMonitorOSKernelCompilerFile-SystemScreen ResolutionNamd_test BenchmarksSystem Logs- Transparent Huge Pages: always- FFLAGS="-O3 -march=znver4 -mtune=znver4 -mfma -mavx2 -m3dnow -fomit-frame-pointer -flto -ffast-math -I/include" CXXFLAGS="-O3 -march=znver4 -mtune=znver4 -mfma -mavx2 -m3dnow -fomit-frame-pointer -flto -ffast-math -I/include" LDFLAGS="-L/lib -flto" FCFLAGS="-O3 -march=znver4 -mtune=znver4 -mfma -mavx2 -m3dnow -fomit-frame-pointer -flto -ffast-math -I/include" CFLAGS="-O3 -march=znver4 -mtune=znver4 -mfma -mavx2 -m3dnow -fomit-frame-pointer -flto -ffast-math -I/include" - Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa101148 - gather_data_sampling: Not affected + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + reg_file_data_sampling: Not affected + retbleed: Not affected + spec_rstack_overflow: Mitigation of Safe RET + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS; IBPB: conditional; STIBP: always-on; RSB filling; PBRSB-eIBRS: Not affected; BHI: Not affected + srbds: Not affected + tsx_async_abort: Not affected

NAMD

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0Input: ATPase with 327,506 Atomsfirst_run246810SE +/- 0.09516, N = 48.16256

OpenBenchmarking.orgns/day, More Is BetterNAMD 3.0Input: STMV with 1,066,628 Atomsfirst_run0.7051.412.1152.823.525SE +/- 0.00128, N = 33.13329