cp2k-benchmark-2024-03-02
2 x Intel Xeon E5-2699 v4 testing with a Supermicro X10DRL-i v1.01 (3.4 BIOS) and ASPEED on Ubuntu 22.04 via the Phoronix Test Suite.
2 x Intel Xeon E5-2699 v4
Processor: 2 x Intel Xeon E5-2699 v4 @ 3.60GHz (44 Cores / 88 Threads), Motherboard: Supermicro X10DRL-i v1.01 (3.4 BIOS), Chipset: Intel Xeon E7 v4/Xeon, Memory: 128GB, Disk: 1920GB INTEL SSDSC2KG01, Graphics: ASPEED, Network: 2 x Intel I210
OS: Ubuntu 22.04, Kernel: 6.5.0-21-generic (x86_64), Display Server: X Server 1.21.1.4, Vulkan: 1.3.255, Compiler: GCC 11.4.0, File-System: ext4, Screen Resolution: 1024x768
Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: intel_cpufreq performance - CPU Microcode: 0xb000040
Python Notes: Python 3.10.12
Security Notes: gather_data_sampling: Not affected + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + mmio_stale_data: Mitigation of Clear buffers; SMT vulnerable + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional IBRS_FW STIBP: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Mitigation of Clear buffers; SMT vulnerable
CP2K Molecular Dynamics
CP2K is an open-source molecular dynamics software package focused on quantum chemistry and solid-state physics. More details on the CP2K benchmark test cases and details can be found @ https://www.cp2k.org/performance Learn more via the OpenBenchmarking.org test page.
Input: H2O-DFT-LS
2 x Intel Xeon E5-2699 v4: The test quit with a non-zero exit status. E: mpirun noticed that process rank 9 with PID 0 on node eszkin-Super-Server exited on signal 9 (Killed).
2 x Intel Xeon E5-2699 v4
Processor: 2 x Intel Xeon E5-2699 v4 @ 3.60GHz (44 Cores / 88 Threads), Motherboard: Supermicro X10DRL-i v1.01 (3.4 BIOS), Chipset: Intel Xeon E7 v4/Xeon, Memory: 128GB, Disk: 1920GB INTEL SSDSC2KG01, Graphics: ASPEED, Network: 2 x Intel I210
OS: Ubuntu 22.04, Kernel: 6.5.0-21-generic (x86_64), Display Server: X Server 1.21.1.4, Vulkan: 1.3.255, Compiler: GCC 11.4.0, File-System: ext4, Screen Resolution: 1024x768
Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-XeT9lY/gcc-11-11.4.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: intel_cpufreq performance - CPU Microcode: 0xb000040
Python Notes: Python 3.10.12
Security Notes: gather_data_sampling: Not affected + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + mmio_stale_data: Mitigation of Clear buffers; SMT vulnerable + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional IBRS_FW STIBP: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Mitigation of Clear buffers; SMT vulnerable
Testing initiated at 2 March 2024 20:52 by user eszkin.