kernel-scientific AMD Ryzen 7 1700 Eight-Core testing with a Gigabyte AB350M-Gaming 3-CF (F51g BIOS) and Sapphire AMD Radeon HD 4550 on Ubuntu 20.04 via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2301285-HYDR-KERNELS54&rdt&grw .
kernel-scientific Processor Motherboard Chipset Memory Disk Graphics Audio Monitor Network OS Kernel Vulkan Compiler File-System Screen Resolution default default mitigations=off 5.15.30-hdr AMD Ryzen 7 1700 Eight-Core @ 3.50GHz (8 Cores / 16 Threads) Gigabyte AB350M-Gaming 3-CF (F51g BIOS) AMD 17h 8GB 1000GB Western Digital WD10EFRX-68J + 1000GB Hitachi HDT72101 + 32GB TS32GMTS800 + 1000GB SAMSUNG HD103UJ Sapphire AMD Radeon HD 4550 512MB AMD RV710/730 PLG2488H Realtek RTL8111/8168/8411 Ubuntu 20.04 5.15.0-58-generic (x86_64) 1.1.182 GCC 9.4.0 zfs 1920x1080 1000GB Western Digital WD10EFRX-68J + 1000GB Hitachi HDT72101 + 32GB TS32GMTS800 Sapphire AMD Radeon HD 4550 5.15.30-hdr (x86_64) 1024x768 OpenBenchmarking.org Kernel Details - Transparent Huge Pages: madvise Compiler Details - --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-Av3uEd/gcc-9-9.4.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details - Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8001138 Python Details - Python 3.8.10 Security Details - default: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT vulnerable + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: disabled RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected - default mitigations=off: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Vulnerable + spec_store_bypass: Vulnerable + spectre_v1: Vulnerable: __user pointer sanitization and usercopy barriers only; no swapgs barriers + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected - 5.15.30-hdr: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Vulnerable + spectre_v1: Vulnerable: __user pointer sanitization and usercopy barriers only; no swapgs barriers + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled + srbds: Not affected + tsx_async_abort: Not affected
kernel-scientific fftw: Stock - 1D FFT Size 32 fftw: Stock - 2D FFT Size 32 fftw: Stock - 1D FFT Size 4096 fftw: Stock - 2D FFT Size 4096 fftw: Float + SSE - 1D FFT Size 32 fftw: Float + SSE - 2D FFT Size 32 fftw: Float + SSE - 1D FFT Size 4096 fftw: Float + SSE - 2D FFT Size 4096 hmmer: Pfam Database Search mrbayes: Primate Phylogeny Analysis himeno: Poisson Pressure Solver hpcc: G-HPL cloverleaf: Lagrangian-Eulerian Hydrodynamics dolfyn: Computational Fluid Dynamics gromacs: MPI CPU - water_GMX50_bare lammps: 20k Atoms lammps: Rhodopsin Protein namd: ATPase Simulation - 327,506 Atoms arrayfire: BLAS CPU mt-dgemm: Sustained Floating-Point Rate pennant: sedovbig pennant: leblancbig amg: ffte: N=256, 1D Complex FFT Routine kripke: mocassin: Dust 2D tau100.0 minife: Small incompact3d: input.i3d 129 Cells Per Direction incompact3d: input.i3d 193 Cells Per Direction cp2k: Fayalite-FIST default default mitigations=off 5.15.30-hdr 6958.1 8690.4 6756.9 4997.3 10719 28344 27921 13450 159.230 154.227 3826.508282 64.00567 139.59 21.446 0.596 4.695 4.593 2.73229 196.104 1.353413 91.99171 66.78679 269121233 36873.342192894 29927647 280 5869.06 38.0383034 138.638310 682.008 6942.3 8193.3 6735.2 4974.8 10816 28364 28028 13490 157.855 152.742 3867.533008 63.57920 139.18 21.406 0.608 4.698 4.608 2.72922 195.339 1.377947 92.25545 66.44555 269542133 37510.483470889 30653590 282 5876.58 37.8776042 136.512207 683.831 5979.5 8100.1 6767.4 4990.6 10714.7 27134 27822 13465 173.577 149.756 3893.117655 52.69553 138.53 21.507 0.601 4.415 4.361 2.72996 199.895 1.403760 91.75040 65.79164 270086767 39372.658435520 30606070 266 5897.06 39.3337796 139.082275 697.237 OpenBenchmarking.org
FFTW Build: Stock - Size: 1D FFT Size 32 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Stock - Size: 1D FFT Size 32 default default mitigations=off 5.15.30-hdr 1500 3000 4500 6000 7500 SE +/- 103.41, N = 15 SE +/- 102.34, N = 15 SE +/- 322.28, N = 12 6958.1 6942.3 5979.5 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Stock - Size: 2D FFT Size 32 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Stock - Size: 2D FFT Size 32 default default mitigations=off 5.15.30-hdr 2K 4K 6K 8K 10K SE +/- 109.62, N = 15 SE +/- 3.16, N = 3 SE +/- 96.85, N = 4 8690.4 8193.3 8100.1 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Stock - Size: 1D FFT Size 4096 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Stock - Size: 1D FFT Size 4096 default default mitigations=off 5.15.30-hdr 1500 3000 4500 6000 7500 SE +/- 8.27, N = 3 SE +/- 11.52, N = 3 SE +/- 4.37, N = 3 6756.9 6735.2 6767.4 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Stock - Size: 2D FFT Size 4096 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Stock - Size: 2D FFT Size 4096 default default mitigations=off 5.15.30-hdr 1100 2200 3300 4400 5500 SE +/- 16.35, N = 3 SE +/- 24.04, N = 3 SE +/- 21.71, N = 3 4997.3 4974.8 4990.6 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Float + SSE - Size: 1D FFT Size 32 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Float + SSE - Size: 1D FFT Size 32 default default mitigations=off 5.15.30-hdr 2K 4K 6K 8K 10K SE +/- 4.58, N = 3 SE +/- 14.17, N = 3 SE +/- 66.80, N = 13 10719.0 10816.0 10714.7 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Float + SSE - Size: 2D FFT Size 32 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Float + SSE - Size: 2D FFT Size 32 default default mitigations=off 5.15.30-hdr 6K 12K 18K 24K 30K SE +/- 37.33, N = 3 SE +/- 18.48, N = 3 SE +/- 494.14, N = 15 28344 28364 27134 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Float + SSE - Size: 1D FFT Size 4096 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Float + SSE - Size: 1D FFT Size 4096 default default mitigations=off 5.15.30-hdr 6K 12K 18K 24K 30K SE +/- 70.30, N = 3 SE +/- 129.82, N = 3 SE +/- 43.59, N = 3 27921 28028 27822 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
FFTW Build: Float + SSE - Size: 2D FFT Size 4096 OpenBenchmarking.org Mflops, More Is Better FFTW 3.3.6 Build: Float + SSE - Size: 2D FFT Size 4096 default default mitigations=off 5.15.30-hdr 3K 6K 9K 12K 15K SE +/- 10.93, N = 3 SE +/- 42.79, N = 3 SE +/- 28.02, N = 3 13450 13490 13465 1. (CC) gcc options: -pthread -O3 -fomit-frame-pointer -mtune=native -malign-double -fstrict-aliasing -fno-schedule-insns -ffast-math -lm
Timed HMMer Search Pfam Database Search OpenBenchmarking.org Seconds, Fewer Is Better Timed HMMer Search 3.3.2 Pfam Database Search default default mitigations=off 5.15.30-hdr 40 80 120 160 200 SE +/- 1.65, N = 12 SE +/- 0.45, N = 3 SE +/- 0.46, N = 3 159.23 157.86 173.58 1. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi
Timed MrBayes Analysis Primate Phylogeny Analysis OpenBenchmarking.org Seconds, Fewer Is Better Timed MrBayes Analysis 3.2.7 Primate Phylogeny Analysis default default mitigations=off 5.15.30-hdr 30 60 90 120 150 SE +/- 0.74, N = 3 SE +/- 0.80, N = 3 SE +/- 0.27, N = 3 154.23 152.74 149.76 1. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm
Himeno Benchmark Poisson Pressure Solver OpenBenchmarking.org MFLOPS, More Is Better Himeno Benchmark 3.0 Poisson Pressure Solver default default mitigations=off 5.15.30-hdr 800 1600 2400 3200 4000 SE +/- 32.49, N = 3 SE +/- 26.40, N = 15 SE +/- 55.25, N = 3 3826.51 3867.53 3893.12 1. (CC) gcc options: -O3 -mavx2
HPC Challenge Test / Class: G-HPL OpenBenchmarking.org GFLOPS, More Is Better HPC Challenge 1.5.0 Test / Class: G-HPL default default mitigations=off 5.15.30-hdr 14 28 42 56 70 SE +/- 0.34, N = 3 SE +/- 0.48, N = 3 SE +/- 0.49, N = 3 64.01 63.58 52.70 1. (CC) gcc options: -lblas -lm -pthread -lmpi -fomit-frame-pointer -funroll-loops 2. ATLAS + Open MPI 4.0.3
CloverLeaf Lagrangian-Eulerian Hydrodynamics OpenBenchmarking.org Seconds, Fewer Is Better CloverLeaf Lagrangian-Eulerian Hydrodynamics default default mitigations=off 5.15.30-hdr 30 60 90 120 150 SE +/- 0.08, N = 3 SE +/- 0.19, N = 3 SE +/- 0.10, N = 3 139.59 139.18 138.53 1. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp
Dolfyn Computational Fluid Dynamics OpenBenchmarking.org Seconds, Fewer Is Better Dolfyn 0.527 Computational Fluid Dynamics default default mitigations=off 5.15.30-hdr 5 10 15 20 25 SE +/- 0.15, N = 3 SE +/- 0.15, N = 13 SE +/- 0.25, N = 4 21.45 21.41 21.51
GROMACS Implementation: MPI CPU - Input: water_GMX50_bare OpenBenchmarking.org Ns Per Day, More Is Better GROMACS 2022.1 Implementation: MPI CPU - Input: water_GMX50_bare default default mitigations=off 5.15.30-hdr 0.1368 0.2736 0.4104 0.5472 0.684 SE +/- 0.007, N = 3 SE +/- 0.001, N = 3 SE +/- 0.000, N = 3 0.596 0.608 0.601 1. (CXX) g++ options: -O3 -pthread
LAMMPS Molecular Dynamics Simulator Model: 20k Atoms OpenBenchmarking.org ns/day, More Is Better LAMMPS Molecular Dynamics Simulator 23Jun2022 Model: 20k Atoms default default mitigations=off 5.15.30-hdr 1.0571 2.1142 3.1713 4.2284 5.2855 SE +/- 0.043, N = 7 SE +/- 0.006, N = 3 SE +/- 0.070, N = 9 4.695 4.698 4.415 1. (CXX) g++ options: -O3 -pthread -lm -ldl
LAMMPS Molecular Dynamics Simulator Model: Rhodopsin Protein OpenBenchmarking.org ns/day, More Is Better LAMMPS Molecular Dynamics Simulator 23Jun2022 Model: Rhodopsin Protein default default mitigations=off 5.15.30-hdr 1.0368 2.0736 3.1104 4.1472 5.184 SE +/- 0.036, N = 12 SE +/- 0.040, N = 3 SE +/- 0.053, N = 4 4.593 4.608 4.361 1. (CXX) g++ options: -O3 -pthread -lm -ldl
NAMD ATPase Simulation - 327,506 Atoms OpenBenchmarking.org days/ns, Fewer Is Better NAMD 2.14 ATPase Simulation - 327,506 Atoms default default mitigations=off 5.15.30-hdr 0.6148 1.2296 1.8444 2.4592 3.074 SE +/- 0.00051, N = 3 SE +/- 0.00012, N = 3 SE +/- 0.00060, N = 3 2.73229 2.72922 2.72996
ArrayFire Test: BLAS CPU OpenBenchmarking.org GFLOPS, More Is Better ArrayFire 3.7 Test: BLAS CPU default default mitigations=off 5.15.30-hdr 40 80 120 160 200 SE +/- 1.09, N = 3 SE +/- 0.26, N = 3 SE +/- 1.91, N = 3 196.10 195.34 199.90 1. (CXX) g++ options: -rdynamic
ACES DGEMM Sustained Floating-Point Rate OpenBenchmarking.org GFLOP/s, More Is Better ACES DGEMM 1.0 Sustained Floating-Point Rate default default mitigations=off 5.15.30-hdr 0.3158 0.6316 0.9474 1.2632 1.579 SE +/- 0.012458, N = 3 SE +/- 0.019193, N = 3 SE +/- 0.006679, N = 3 1.353413 1.377947 1.403760 1. (CC) gcc options: -O3 -march=native -fopenmp
Pennant Test: sedovbig OpenBenchmarking.org Hydro Cycle Time - Seconds, Fewer Is Better Pennant 1.0.1 Test: sedovbig default default mitigations=off 5.15.30-hdr 20 40 60 80 100 SE +/- 0.40, N = 3 SE +/- 0.47, N = 3 SE +/- 0.36, N = 3 91.99 92.26 91.75 1. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
Pennant Test: leblancbig OpenBenchmarking.org Hydro Cycle Time - Seconds, Fewer Is Better Pennant 1.0.1 Test: leblancbig default default mitigations=off 5.15.30-hdr 15 30 45 60 75 SE +/- 0.36, N = 3 SE +/- 0.25, N = 3 SE +/- 0.12, N = 3 66.79 66.45 65.79 1. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi
Algebraic Multi-Grid Benchmark OpenBenchmarking.org Figure Of Merit, More Is Better Algebraic Multi-Grid Benchmark 1.2 default default mitigations=off 5.15.30-hdr 60M 120M 180M 240M 300M SE +/- 334412.09, N = 3 SE +/- 655205.65, N = 3 SE +/- 200238.99, N = 3 269121233 269542133 270086767 1. (CC) gcc options: -lparcsr_ls -lparcsr_mv -lseq_mv -lIJ_mv -lkrylov -lHYPRE_utilities -lm -fopenmp -pthread -lmpi
FFTE Test: N=256, 1D Complex FFT Routine OpenBenchmarking.org MFLOPS, More Is Better FFTE 7.0 Test: N=256, 1D Complex FFT Routine default default mitigations=off 5.15.30-hdr 8K 16K 24K 32K 40K SE +/- 298.77, N = 3 SE +/- 304.60, N = 9 SE +/- 1.90, N = 3 36873.34 37510.48 39372.66 1. (F9X) gfortran options: -O3 -fomit-frame-pointer -fopenmp
Kripke OpenBenchmarking.org Throughput FoM, More Is Better Kripke 1.2.4 default default mitigations=off 5.15.30-hdr 7M 14M 21M 28M 35M SE +/- 311858.03, N = 3 SE +/- 286459.37, N = 3 SE +/- 212260.85, N = 12 29927647 30653590 30606070 1. (CXX) g++ options: -O3 -fopenmp
Monte Carlo Simulations of Ionised Nebulae Input: Dust 2D tau100.0 OpenBenchmarking.org Seconds, Fewer Is Better Monte Carlo Simulations of Ionised Nebulae 2019-03-24 Input: Dust 2D tau100.0 default default mitigations=off 5.15.30-hdr 60 120 180 240 300 SE +/- 1.15, N = 3 SE +/- 1.33, N = 3 SE +/- 0.33, N = 3 280 282 266 1. (F9X) gfortran options: -cpp -Jsource/ -ffree-line-length-0 -lm -std=legacy -O3 -O2 -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi
miniFE Problem Size: Small OpenBenchmarking.org CG Mflops, More Is Better miniFE 2.2 Problem Size: Small default default mitigations=off 5.15.30-hdr 1300 2600 3900 5200 6500 SE +/- 7.34, N = 3 SE +/- 5.81, N = 3 SE +/- 6.03, N = 3 5869.06 5876.58 5897.06 1. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi
Xcompact3d Incompact3d Input: input.i3d 129 Cells Per Direction OpenBenchmarking.org Seconds, Fewer Is Better Xcompact3d Incompact3d 2021-03-11 Input: input.i3d 129 Cells Per Direction default default mitigations=off 5.15.30-hdr 9 18 27 36 45 SE +/- 0.04, N = 3 SE +/- 0.05, N = 3 SE +/- 0.25, N = 3 38.04 37.88 39.33 1. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi
Xcompact3d Incompact3d Input: input.i3d 193 Cells Per Direction OpenBenchmarking.org Seconds, Fewer Is Better Xcompact3d Incompact3d 2021-03-11 Input: input.i3d 193 Cells Per Direction default default mitigations=off 5.15.30-hdr 30 60 90 120 150 SE +/- 1.71, N = 3 SE +/- 1.17, N = 3 SE +/- 0.06, N = 3 138.64 136.51 139.08 1. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi
CP2K Molecular Dynamics Input: Fayalite-FIST OpenBenchmarking.org Seconds, Fewer Is Better CP2K Molecular Dynamics 8.2 Input: Fayalite-FIST default default mitigations=off 5.15.30-hdr 150 300 450 600 750 682.01 683.83 697.24
Phoronix Test Suite v10.8.4