heavy

AMD Ryzen 5 3400G testing with a ASUS PRIME B450M-A (2006 BIOS) and ASUS AMD Picasso 2GB on Ubuntu 19.10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2102181-HA-HEAVY903446
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heavyProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverVulkanCompilerFile-SystemScreen Resolution12345AMD Ryzen 5 3400G @ 3.70GHz (4 Cores / 8 Threads)ASUS PRIME B450M-A (2006 BIOS)AMD Raven/Raven22 x 8192 MB DDR4-3000MT/s CRUCIAL29GB INTEL MEMPEK1W032GA + 4 x 6001GB Seagate ST6000VN0033-2EEASUS AMD Picasso 2GB (1400/1500MHz)AMD Raven/Raven2/FenghuangSyncMasterRealtek RTL8111/8168/8411Ubuntu 19.105.3.0-46-generic (x86_64)GNOME Shell 3.34.1X Serverasus1.1.107GCC 9.2.1 20191008ext41280x800OpenBenchmarking.orgKernel Details- Transparent Huge Pages: madviseCompiler Details- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-offload-targets=nvptx-none,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details- Scaling Governor: acpi-cpufreq ondemand (Boost: Enabled) - CPU Microcode: 0x8108109Security Details- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + tsx_async_abort: Not affected

12345Result OverviewPhoronix Test Suite 10.6.1100%100%100%101%101%NAMDNWChemHigh Performance Conjugate GradientGROMACSATPase Simulation - 327,506 AtomsC240 Buckyballwater_GMX50_bare

heavyhpcg: gromacs: water_GMX50_barenamd: ATPase Simulation - 327,506 Atomsnwchem: C240 Buckyball123454.602900.3774.8070419550.54.586330.3774.8168519642.34.612640.3764.8309519674.24.609350.3764.8161219575.84.594360.3754.8403019684.8OpenBenchmarking.org

High Performance Conjugate Gradient

HPCG is the High Performance Conjugate Gradient and is a new scientific benchmark from Sandia National Lans focused for super-computer testing with modern real-world workloads compared to HPCC. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgGFLOP/s, More Is BetterHigh Performance Conjugate Gradient 3.1251431.03782.07563.11344.15125.189SE +/- 0.01237, N = 3SE +/- 0.01212, N = 3SE +/- 0.00905, N = 3SE +/- 0.00058, N = 3SE +/- 0.00327, N = 34.586334.594364.602904.609354.612641. (CXX) g++ options: -O3 -ffast-math -ftree-vectorize -pthread -lmpi_cxx -lmpi
OpenBenchmarking.orgGFLOP/s, More Is BetterHigh Performance Conjugate Gradient 3.125143246810Min: 4.56 / Avg: 4.59 / Max: 4.6Min: 4.58 / Avg: 4.59 / Max: 4.62Min: 4.59 / Avg: 4.6 / Max: 4.62Min: 4.61 / Avg: 4.61 / Max: 4.61Min: 4.61 / Avg: 4.61 / Max: 4.621. (CXX) g++ options: -O3 -ffast-math -ftree-vectorize -pthread -lmpi_cxx -lmpi

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing on the CPU with the water_GMX50 data. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2021Input: water_GMX50_bare534120.08480.16960.25440.33920.424SE +/- 0.001, N = 3SE +/- 0.000, N = 3SE +/- 0.001, N = 3SE +/- 0.000, N = 3SE +/- 0.000, N = 30.3750.3760.3760.3770.3771. (CXX) g++ options: -O3 -pthread
OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2021Input: water_GMX50_bare5341212345Min: 0.37 / Avg: 0.37 / Max: 0.38Min: 0.38 / Avg: 0.38 / Max: 0.38Min: 0.38 / Avg: 0.38 / Max: 0.38Min: 0.38 / Avg: 0.38 / Max: 0.38Min: 0.38 / Avg: 0.38 / Max: 0.381. (CXX) g++ options: -O3 -pthread

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms532411.08912.17823.26734.35645.4455SE +/- 0.00115, N = 3SE +/- 0.00224, N = 3SE +/- 0.00228, N = 3SE +/- 0.00097, N = 3SE +/- 0.00203, N = 34.840304.830954.816854.816124.80704
OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms53241246810Min: 4.84 / Avg: 4.84 / Max: 4.84Min: 4.83 / Avg: 4.83 / Max: 4.84Min: 4.81 / Avg: 4.82 / Max: 4.82Min: 4.81 / Avg: 4.82 / Max: 4.82Min: 4.8 / Avg: 4.81 / Max: 4.81

NWChem

NWChem is an open-source high performance computational chemistry package. Per NWChem's documentation, "NWChem aims to provide its users with computational chemistry tools that are scalable both in their ability to treat large scientific computational chemistry problems efficiently, and in their use of available parallel computing resources from high-performance parallel supercomputers to conventional workstation clusters." Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterNWChem 7.0.2Input: C240 Buckyball532414K8K12K16K20K19684.819674.219642.319575.819550.51. (F9X) gfortran options: -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lsolvation -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -ltce -lbq -lmm -lcons -lperfm -ldntmc -lccca -ldimqm -lga -larmci -lpeigs -l64to32 -lopenblas -lpthread -lrt -llapack -lnwcblas -lmpi_usempif08 -lmpi_mpifh -lmpi -lcomex -lm -m64 -ffast-math -std=legacy -fdefault-integer-8 -finline-functions -O2