namdresult

2 x AMD EPYC 7742 64-Core testing with a Lenovo 7D2XCTO1WW v03 (D8E103A-1.00 BIOS) and Matrox MGA G200e [Pilot] on Red Hat Enterprise Linux 8.2 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2005282-NI-NAMDRESUL88
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
namd1
May 28 2020
  3 Minutes


namdresultOpenBenchmarking.orgPhoronix Test Suite2 x AMD EPYC 7742 64-Core @ 2.25GHz (128 Cores / 256 Threads)Lenovo 7D2XCTO1WW v03 (D8E103A-1.00 BIOS)AMD Starship/Matisse8 x 32 GB DDR4-3200MT/s Samsung M393A4K40DB2-CWE2 x 1920GB MZQLB1T9HAJR-000V3 + 128GB ThinkSystem M.2Matrox MGA G200e [Pilot]LT2252p Wide2 x QLogic FastLinQ QL41000 10/25/40/50GbERed Hat Enterprise Linux 8.24.18.0-193.1.2.el8_2.x86_64 (x86_64)GNOME Shell 3.32.2X ServerGCC 8.3.1 20191121xfs1680x1050ProcessorMotherboardChipsetMemoryDiskGraphicsMonitorNetworkOSKernelDesktopDisplay ServerCompilerFile-SystemScreen ResolutionNamdresult BenchmarksSystem Logs- Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025- SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + tsx_async_abort: Not affected

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.13ATPase Simulation - 327,506 Atomsnamd10.05860.11720.17580.23440.293SE +/- 0.00379, N = 40.26064