NAMD
AMD Ryzen Threadripper 3990X 64-Core testing with a MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS) and NVIDIA GeForce GT 710 1GB on CentOS Linux 7 via the Phoronix Test Suite.
Clang 10 w/ flags
Processor: AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads), Motherboard: MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS), Chipset: AMD Starship/Matisse, Memory: 8 x 16384 MB DDR4-2933MT/s Kingston, Disk: 500GB Samsung SSD 860, Graphics: NVIDIA GeForce GT 710 1GB, Audio: NVIDIA GK208 HDMI/DP, Monitor: HP V190, Network: Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: Clang 10.0.0 + GCC 9.2.0 + LLVM 10.0.0, File-System: xfs, Screen Resolution: 1366x768
Processor Notes: Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025
Security Notes: SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected
GCC 9.2.0 w/ flags
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: GCC 9.2.0 + Clang 10.0.0 + LLVM 10.0.0, File-System: xfs, Screen Resolution: 1366x768
GCC 9.2.0 w/flags wo/LLVM
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: GCC 9.2.0, File-System: xfs, Screen Resolution: 1366x768
ICC w/flags
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: ICC + GCC 9.2.0 + Intel oneAPI DPC++ Compiler 2021.1-beta03 (2019.10.0.1121), File-System: xfs, Screen Resolution: 1366x768
NAMD
NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.
Clang 10 w/ flags
Processor: AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads), Motherboard: MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS), Chipset: AMD Starship/Matisse, Memory: 8 x 16384 MB DDR4-2933MT/s Kingston, Disk: 500GB Samsung SSD 860, Graphics: NVIDIA GeForce GT 710 1GB, Audio: NVIDIA GK208 HDMI/DP, Monitor: HP V190, Network: Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: Clang 10.0.0 + GCC 9.2.0 + LLVM 10.0.0, File-System: xfs, Screen Resolution: 1366x768
Processor Notes: Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025
Security Notes: SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected
Testing initiated at 26 March 2020 16:18 by user root.
GCC 9.2.0 w/ flags
Processor: AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads), Motherboard: MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS), Chipset: AMD Starship/Matisse, Memory: 8 x 16384 MB DDR4-2933MT/s Kingston, Disk: 500GB Samsung SSD 860, Graphics: NVIDIA GeForce GT 710 1GB, Audio: NVIDIA GK208 HDMI/DP, Monitor: HP V190, Network: Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: GCC 9.2.0 + Clang 10.0.0 + LLVM 10.0.0, File-System: xfs, Screen Resolution: 1366x768
Processor Notes: Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025
Security Notes: SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected
Testing initiated at 26 March 2020 16:23 by user root.
GCC 9.2.0 w/flags wo/LLVM
Processor: AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads), Motherboard: MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS), Chipset: AMD Starship/Matisse, Memory: 8 x 16384 MB DDR4-2933MT/s Kingston, Disk: 500GB Samsung SSD 860, Graphics: NVIDIA GeForce GT 710 1GB, Audio: NVIDIA GK208 HDMI/DP, Monitor: HP V190, Network: Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: GCC 9.2.0, File-System: xfs, Screen Resolution: 1366x768
Processor Notes: Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025
Security Notes: SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected
Testing initiated at 26 March 2020 16:32 by user root.
ICC w/flags
Processor: AMD Ryzen Threadripper 3990X 64-Core @ 2.90GHz (64 Cores / 128 Threads), Motherboard: MSI Creator TRX40 (MS-7C59) v1.0 (1.30 BIOS), Chipset: AMD Starship/Matisse, Memory: 8 x 16384 MB DDR4-2933MT/s Kingston, Disk: 500GB Samsung SSD 860, Graphics: NVIDIA GeForce GT 710 1GB, Audio: NVIDIA GK208 HDMI/DP, Monitor: HP V190, Network: Aquantia AQC107 NBase-T/IEEE + Intel I211 + 2 x Intel 82599ES 10-Gigabit SFI/SFP+ + Intel Device 2723
OS: CentOS Linux 7, Kernel: 5.5.10-1.el7.elrepo.x86_64 (x86_64), Display Server: X Server, Compiler: ICC + GCC 9.2.0 + Intel oneAPI DPC++ Compiler 2021.1-beta03 (2019.10.0.1121), File-System: xfs, Screen Resolution: 1366x768
Processor Notes: Scaling Governor: acpi-cpufreq performance - CPU Microcode: 0x8301025
Security Notes: SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + tsx_async_abort: Not affected
Testing initiated at 26 March 2020 16:36 by user root.