hmmer26

Intel Core i7-8700T testing with a HP 83EA (Q12 Ver. 02.06.03 BIOS) and Intel UHD 630 3GB on Clear Linux OS 30260 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1907094-HV-HMMER264319
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
hmmer26
July 09 2019
  1 Minute


hmmer26OpenBenchmarking.orgPhoronix Test SuiteIntel Core i7-8700T @ 2.40GHz (6 Cores / 12 Threads)HP 83EA (Q12 Ver. 02.06.03 BIOS)Intel Cannon Lake PCH8192MB128GB Western Digital PC SN520 SDAPNUW-128G-1006 + 1000GB Seagate ST1000LM049-2GH1Intel UHD 630 3GB (1200MHz)Conexant GenericIntel I219-LM + Realtek RTL8822BE 802.11a/b/g/n/acClear Linux OS 302605.1.16-795.native (x86_64)GNOME Shell 3.32.2X Server 1.20.5modesetting 1.20.54.5 Mesa 19.2.0-develOpenCL 2.11.1.107GCC 9.1.1 20190707 gcc-9-branch@273177 + Clang 8.0.0 + LLVM 8.0.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLOpenCLVulkanCompilerFile-SystemScreen ResolutionHmmer26 BenchmarksSystem Logs- CFFLAGS=-g-O3-feliminate-unused-debug-types-pipe-Wall-Wp-D_FORTIFY_SOURCE=2-fexceptions-fstack-protector--param=ssp-buffer-size=32-m64-fasynchronous-unwind-tables-Wp-D_REENTRANT-ftree-loop-distribute-patterns-Wl-z-Wl now-Wl-z-Wl relro-malign-data=abi-fno-semantic-interposition-ftree-vectorize-ftree-loop-vectorize-Wl-sort-common-Wl--enable-new-dtags FFLAGS=-g-O3-feliminate-unused-debug-types-pipe-Wall-Wp-D_FORTIFY_SOURCE=2-fexceptions-fstack-protector--param=ssp-buffer-size=32-m64-fasynchronous-unwind-tables-Wp-D_REENTRANT-ftree-loop-distribute-patterns-Wl-z-Wl relro-malign-data=abi-fno-semantic-interposition-ftree-vectorize-ftree-loop-vectorize-Wl--enable-new-dtags CXXFLAGS=-g-O3-feliminate-unused-debug-types-pipe-Wall-Wp-D_FORTIFY_SOURCE=2-fexceptions-fstack-protector--param=ssp-buffer-size=32-Wformat-Wformat-security-m64-fasynchronous-unwind-tables-Wp-D_REENTRANT-ftree-loop-distribute-patterns-Wl-z-Wl relro-fno-semantic-interposition-ffat-lto-objects-fno-signed-zeros-fno-trapping-math-fassociative-math-Wl-sort-common-Wl--enable-new-dtags-mtune=skylake-fvisibility-inlines-hidden-Wl--enable-new-dtags MESA_GLSL_CACHE_DISABLE=0 CFLAGS=-g-O3-feliminate-unused-debug-types-pipe-Wall-Wp-D_FORTIFY_SOURCE=2-fexceptions-fstack-protector--param=ssp-buffer-size=32-Wformat-Wformat-security-m64-fasynchronous-unwind-tables-Wp-D_REENTRANT-ftree-loop-distribute-patterns-Wl-z-Wl relro-fno-semantic-interposition-ffat-lto-objects-fno-signed-zeros-fno-trapping-math-fassociative-math-Wl-sort-common-Wl--enable-new-dtags-mtune=skylake THEANO_FLAGS=floatX=float32 openmp=true gcc.cxxflags="-ftree-vectorize-mavx" - --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --disable-werror --enable-__cxa_atexit --enable-bootstrap --enable-cet --enable-clocale=gnu --enable-default-pie --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-gcc-major-version-only --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell - Scaling Governor: intel_pstate performance- l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchhmmer26246810SE +/- 0.01, N = 37.70