WinServer2016

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Bioinformatics 3 Tests
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WinServer2016
March 28 2019
  1 Hour, 20 Minutes
Win10DockerForWindows
April 01 2019
  1 Hour, 21 Minutes
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WinServer2016

Processor: Intel Core i3-8100 (2 Cores), Motherboard: Microsoft Virtual Machine (Hyper-V UEFI v1.0 BIOS), Memory: 4096MB, Disk: 64GB Virtual Disk

OS: Clear Linux OS 27600, Kernel: 4.9.125-linuxkit (x86_64), Compiler: GCC 8.2.1 20180502 + Clang 7.0.1 + LLVM 7.0.1, File-System: overlayfs, System Layer: container-other

Compiler Notes: --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --enable-__cxa_atexit --enable-bootstrap --enable-clocale=gnu --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell
Security Notes: KPTI + __user pointer sanitization + Full generic retpoline + PTE Inversion

Win10DockerForWindows

Changed Motherboard to Microsoft Virtual Machine (Hyper-V UEFI v3.0 BIOS).

Security Change: KPTI + __user pointer sanitization + Full generic retpoline IBPB IBRS_FW + PTE Inversion

WinServer2016OpenBenchmarking.orgPhoronix Test SuiteIntel Core i3-8100 (2 Cores)Microsoft Virtual Machine (Hyper-V UEFI v1.0 BIOS)Microsoft Virtual Machine (Hyper-V UEFI v3.0 BIOS)4096MB64GB Virtual DiskClear Linux OS 276004.9.125-linuxkit (x86_64)GCC 8.2.1 20180502 + Clang 7.0.1 + LLVM 7.0.1overlayfscontainer-otherProcessorMotherboardsMemoryDiskOSKernelCompilerFile-SystemSystem LayerWinServer2016 BenchmarksSystem Logs- --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --enable-__cxa_atexit --enable-bootstrap --enable-clocale=gnu --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell - WinServer2016: KPTI + __user pointer sanitization + Full generic retpoline + PTE Inversion - Win10DockerForWindows: KPTI + __user pointer sanitization + Full generic retpoline IBPB IBRS_FW + PTE Inversion

WinServer2016 vs. Win10DockerForWindows ComparisonPhoronix Test SuiteBaseline+8.2%+8.2%+16.4%+16.4%+24.6%+24.6%8.1%3.8%A.C.P32.7%M.S.A11.8%Total Time11.3%R.T.P.I.C8.1%F.F.TElapsed Time5.7%Total Time5%C.C.4.S4.4%QuasigroupTSCPTimed MAFFT AlignmentSudokutdcrawSciMarkCraftyGNU GMP GMPbenchFhourstonesMinionWinServer2016Win10DockerForWindows

WinServer2016hmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisgmpbench: Total Timefhourstones: Complex Connect-4 Solvingbyte: Dhrystone 2byte: Integer Arithmeticbyte: Register Arithmeticbyte: Floating-Point Arithmeticscimark2: Compositescimark2: Monte Carloscimark2: Fast Fourier Transformscimark2: Sparse Matrix Multiplyscimark2: Dense LU Matrix Factorizationscimark2: Jacobi Successive Over-Relaxationcrafty: Elapsed Timetscp: AI Chess Performancedcraw: RAW To PPM Image Conversionminion: Gracefulminion: Solitaireminion: Quasigroupsudokut: Total TimeWinServer2016Win10DockerForWindows17.769.034554745128813515057211114426722352395289110187331164115905715.6259.9480.3313612.9418.0810.10455452012343356234181111440673254239428621018693571587314416.8960.7081.3613114.40OpenBenchmarking.org

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchWinServer2016Win10DockerForWindows48121620SE +/- 0.07, N = 3SE +/- 0.01, N = 317.7618.081. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchWinServer2016Win10DockerForWindows510152025Min: 17.67 / Avg: 17.76 / Max: 17.89Min: 18.06 / Avg: 18.08 / Max: 18.091. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence AlignmentWinServer2016Win10DockerForWindows3691215SE +/- 0.02, N = 3SE +/- 0.05, N = 39.0310.101. (CC) gcc options: -std=c99 -O3 -lm -lpthread
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence AlignmentWinServer2016Win10DockerForWindows3691215Min: 9.01 / Avg: 9.03 / Max: 9.06Min: 10.01 / Avg: 10.1 / Max: 10.161. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Timed MrBayes Analysis

This test performs a bayesian analysis of a set of primate genome sequences in order to estimate their phylogeny. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisWinServer2016Win10DockerForWindows100200300400500SE +/- 0.27, N = 3SE +/- 0.27, N = 34554551. (CC) gcc options: -march=native -O3 -msse -mfpmath=sse -lm -pthread -lmpi
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny AnalysisWinServer2016Win10DockerForWindows80160240320400Min: 454.55 / Avg: 454.89 / Max: 455.43Min: 454.94 / Avg: 455.48 / Max: 455.791. (CC) gcc options: -march=native -O3 -msse -mfpmath=sse -lm -pthread -lmpi

GNU GMP GMPbench

GMPbench is a test of the GMP 6.1.2 math library. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgGMPbench Score, More Is BetterGNU GMP GMPbench 6.1.2Total TimeWinServer2016Win10DockerForWindows10002000300040005000474545201. (CC) gcc options: -O3 -fomit-frame-pointer -lm

Fhourstones

This integer benchmark solves positions in the game of Connect-4, as played on a vertical 7x6 board. By default, it uses a 64Mb transposition table with the twobig replacement strategy. Positions are represented as 64-bit bitboards, and the hash function is computed using a single 64-bit modulo operation, giving 64-bit machines a slight edge. The alpha-beta searcher sorts moves dynamically based on the history heuristic. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgKpos / sec, More Is BetterFhourstones 3.1Complex Connect-4 SolvingWinServer2016Win10DockerForWindows3K6K9K12K15KSE +/- 25.25, N = 3SE +/- 12.80, N = 312881123431. (CC) gcc options: -O3
OpenBenchmarking.orgKpos / sec, More Is BetterFhourstones 3.1Complex Connect-4 SolvingWinServer2016Win10DockerForWindows2K4K6K8K10KMin: 12847.2 / Avg: 12880.87 / Max: 12930.3Min: 12321.7 / Avg: 12343.33 / Max: 123661. (CC) gcc options: -O3

BYTE Unix Benchmark

This is a test of BYTE. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Computational Test: Dhrystone 2WinServer2016Win10DockerForWindows8M16M24M32M40MSE +/- 69085.48, N = 3SE +/- 9639.34, N = 33515057235623418
OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Computational Test: Dhrystone 2WinServer2016Win10DockerForWindows6M12M18M24M30MMin: 35059931.2 / Avg: 35150572.43 / Max: 35286206.6Min: 35604459.8 / Avg: 35623417.53 / Max: 35635930.2

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Computational Test: Integer ArithmeticWinServer2016Win10DockerForWindows0.2250.450.6750.91.12511

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Computational Test: Register ArithmeticWinServer2016Win10DockerForWindows0.2250.450.6750.91.12511

OpenBenchmarking.orgLPS, More Is BetterBYTE Unix Benchmark 3.6Computational Test: Floating-Point ArithmeticWinServer2016Win10DockerForWindows0.2250.450.6750.91.12511

SciMark

This test runs the ANSI C version of SciMark 2.0, which is a benchmark for scientific and numerical computing developed by programmers at the National Institute of Standards and Technology. This test is made up of Fast Foruier Transform, Jacobi Successive Over-relaxation, Monte Carlo, Sparse Matrix Multiply, and dense LU matrix factorization benchmarks. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: CompositeWinServer2016Win10DockerForWindows30060090012001500SE +/- 4.00, N = 3SE +/- 3.56, N = 3144214401. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: CompositeWinServer2016Win10DockerForWindows30060090012001500Min: 1436.61 / Avg: 1442.06 / Max: 1449.87Min: 1436.2 / Avg: 1440.25 / Max: 1447.341. (CC) gcc options: -lm

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Monte CarloWinServer2016Win10DockerForWindows150300450600750SE +/- 1.15, N = 3SE +/- 0.46, N = 36726731. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Monte CarloWinServer2016Win10DockerForWindows120240360480600Min: 670.58 / Avg: 671.95 / Max: 674.24Min: 672.34 / Avg: 673.19 / Max: 673.931. (CC) gcc options: -lm

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Fast Fourier TransformWinServer2016Win10DockerForWindows60120180240300SE +/- 0.42, N = 3SE +/- 9.78, N = 32352541. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Fast Fourier TransformWinServer2016Win10DockerForWindows50100150200250Min: 234.05 / Avg: 234.71 / Max: 235.48Min: 235.24 / Avg: 254.47 / Max: 267.151. (CC) gcc options: -lm

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Sparse Matrix MultiplyWinServer2016Win10DockerForWindows5001000150020002500SE +/- 5.82, N = 3SE +/- 0.98, N = 3239523941. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Sparse Matrix MultiplyWinServer2016Win10DockerForWindows400800120016002000Min: 2386.46 / Avg: 2395.02 / Max: 2406.14Min: 2391.67 / Avg: 2393.62 / Max: 2394.791. (CC) gcc options: -lm

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Dense LU Matrix FactorizationWinServer2016Win10DockerForWindows6001200180024003000SE +/- 11.11, N = 3SE +/- 14.22, N = 3289128621. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Dense LU Matrix FactorizationWinServer2016Win10DockerForWindows5001000150020002500Min: 2876.99 / Avg: 2891.01 / Max: 2912.94Min: 2835.11 / Avg: 2861.95 / Max: 2883.521. (CC) gcc options: -lm

OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Jacobi Successive Over-RelaxationWinServer2016Win10DockerForWindows2004006008001000SE +/- 1.77, N = 3SE +/- 0.39, N = 3101810181. (CC) gcc options: -lm
OpenBenchmarking.orgMflops, More Is BetterSciMark 2.0Computational Test: Jacobi Successive Over-RelaxationWinServer2016Win10DockerForWindows2004006008001000Min: 1014.41 / Avg: 1017.63 / Max: 1020.53Min: 1017.29 / Avg: 1018.02 / Max: 1018.621. (CC) gcc options: -lm

Crafty

This is a performance test of Crafty, an advanced open-source chess engine. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNodes Per Second, More Is BetterCrafty 25.2Elapsed TimeWinServer2016Win10DockerForWindows1.6M3.2M4.8M6.4M8MSE +/- 60463.20, N = 3SE +/- 2844.18, N = 3733116469357151. (CC) gcc options: -pthread -lstdc++ -fprofile-use -lm
OpenBenchmarking.orgNodes Per Second, More Is BetterCrafty 25.2Elapsed TimeWinServer2016Win10DockerForWindows1.3M2.6M3.9M5.2M6.5MMin: 7261855 / Avg: 7331164.33 / Max: 7451636Min: 6930628 / Avg: 6935715 / Max: 69404631. (CC) gcc options: -pthread -lstdc++ -fprofile-use -lm

TSCP

This is a performance test of TSCP, Tom Kerrigan's Simple Chess Program, which has a built-in performance benchmark. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNodes Per Second, More Is BetterTSCP 1.81AI Chess PerformanceWinServer2016Win10DockerForWindows200K400K600K800K1000KSE +/- 1947.65, N = 5SE +/- 678.94, N = 511590578731441. (CC) gcc options: -O3 -march=native
OpenBenchmarking.orgNodes Per Second, More Is BetterTSCP 1.81AI Chess PerformanceWinServer2016Win10DockerForWindows200K400K600K800K1000KMin: 1152255 / Avg: 1159057.2 / Max: 1164435Min: 871484 / Avg: 873143.8 / Max: 8756401. (CC) gcc options: -O3 -march=native

dcraw

This test times how long it takes to convert several high-resolution RAW NEF image files to PPM image format using dcraw. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image ConversionWinServer2016Win10DockerForWindows48121620SE +/- 0.03, N = 3SE +/- 0.02, N = 315.6216.891. (CC) gcc options: -lm
OpenBenchmarking.orgSeconds, Fewer Is BetterdcrawRAW To PPM Image ConversionWinServer2016Win10DockerForWindows48121620Min: 15.58 / Avg: 15.62 / Max: 15.68Min: 16.87 / Avg: 16.89 / Max: 16.931. (CC) gcc options: -lm

Minion

Minion is an open-source constraint solver that is designed to be very scalable. This test profile uses Minion's integrated benchmarking problems to solve. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: GracefulWinServer2016Win10DockerForWindows1428425670SE +/- 0.15, N = 3SE +/- 0.10, N = 359.9460.701. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: GracefulWinServer2016Win10DockerForWindows1224364860Min: 59.75 / Avg: 59.94 / Max: 60.23Min: 60.52 / Avg: 60.7 / Max: 60.851. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: SolitaireWinServer2016Win10DockerForWindows20406080100SE +/- 0.23, N = 3SE +/- 0.25, N = 380.3381.361. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: SolitaireWinServer2016Win10DockerForWindows1632486480Min: 79.89 / Avg: 80.33 / Max: 80.64Min: 81 / Avg: 81.36 / Max: 81.831. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic

OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: QuasigroupWinServer2016Win10DockerForWindows306090120150SE +/- 1.26, N = 3SE +/- 0.05, N = 31361311. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic
OpenBenchmarking.orgSeconds, Fewer Is BetterMinion 1.8Benchmark: QuasigroupWinServer2016Win10DockerForWindows306090120150Min: 134.56 / Avg: 135.86 / Max: 138.39Min: 131.23 / Avg: 131.34 / Max: 131.41. (CXX) g++ options: -std=gnu++11 -O3 -fomit-frame-pointer -rdynamic

Sudokut

This is a test of Sudokut, which is a Sudoku puzzle solver written in Tcl. This test measures how long it takes to solve 100 Sudoku puzzles. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total TimeWinServer2016Win10DockerForWindows48121620SE +/- 0.02, N = 3SE +/- 0.03, N = 312.9414.40
OpenBenchmarking.orgSeconds, Fewer Is BetterSudokut 0.4Total TimeWinServer2016Win10DockerForWindows48121620Min: 12.9 / Avg: 12.94 / Max: 12.98Min: 14.36 / Avg: 14.4 / Max: 14.46

WinServer2016

Processor: Intel Core i3-8100 (2 Cores), Motherboard: Microsoft Virtual Machine (Hyper-V UEFI v1.0 BIOS), Memory: 4096MB, Disk: 64GB Virtual Disk

OS: Clear Linux OS 27600, Kernel: 4.9.125-linuxkit (x86_64), Compiler: GCC 8.2.1 20180502 + Clang 7.0.1 + LLVM 7.0.1, File-System: overlayfs, System Layer: container-other

Compiler Notes: --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --enable-__cxa_atexit --enable-bootstrap --enable-clocale=gnu --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell
Security Notes: KPTI + __user pointer sanitization + Full generic retpoline + PTE Inversion

Testing initiated at 28 March 2019 14:15 by user root.

Win10DockerForWindows

Processor: Intel Core i3-8100 (2 Cores), Motherboard: Microsoft Virtual Machine (Hyper-V UEFI v3.0 BIOS), Memory: 4096MB, Disk: 64GB Virtual Disk

OS: Clear Linux OS 27600, Kernel: 4.9.125-linuxkit (x86_64), Compiler: GCC 8.2.1 20180502 + Clang 7.0.1 + LLVM 7.0.1, File-System: overlayfs, System Layer: container-other

Compiler Notes: --build=x86_64-generic-linux --disable-libmpx --disable-libunwind-exceptions --disable-multiarch --disable-vtable-verify --enable-__cxa_atexit --enable-bootstrap --enable-clocale=gnu --enable-gnu-indirect-function --enable-languages=c,c++,fortran,go --enable-ld=default --enable-libstdcxx-pch --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --exec-prefix=/usr --includedir=/usr/include --target=x86_64-generic-linux --with-arch=westmere --with-glibc-version=2.19 --with-gnu-ld --with-isl --with-ppl=yes --with-tune=haswell
Security Notes: KPTI + __user pointer sanitization + Full generic retpoline IBPB IBRS_FW + PTE Inversion

Testing initiated at 1 April 2019 08:26 by user root.