hmmer_keanu

hmmer_test

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  Test
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hmmer_keanu_1
December 09 2014
 


hmmer_keanuOpenBenchmarking.orgPhoronix Test SuiteIntel Core 2 Duo E8400 @ 3.00GHz (2 Cores)ACER EG31MIntel 82G33/G31/P35/P31 + ICH7DH4096MB2 x 500GB Western Digital WD5000AADS-0 + 2 x 2000GB Western Digital WD2000F9YZ-0Intel 82G33/G31 IGPRealtek RTL8111/8168/8411CentOS 6.62.6.32-431.20.3.el6.i686 (i686)IceWMintel 2.21.122.1 Mesa 10.1.2GCC 4.4.7 20120313ext42646x1024ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDesktopDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionHmmer_keanu BenchmarksSystem Logs- --build=i686-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch=i686 --with-cloog --with-ppl --with-tune=generic - Scaling Governor: acpi-cpufreq ondemand- SELinux: Enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchhmmer_keanu_11020304050SE +/- 0.04, N = 345.531. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm