BioComp

Running pts/hmmer-1.1.0, pts/mafft-1.4.0, pts/mrbayes-1.2.0.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1205033-IV-BIOCOMP2093
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
001
May 03 2012
 
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001

Processor: 2 x Intel Xeon E5620 @ 2.40GHz (8 Cores), Motherboard: Dell 0CRH6C, Chipset: Intel 5520 I/O + ICH10R, Memory: 12288MB, Disk: 1000GB Western Digital WDC WD10EALX-759, Graphics: NVIDIA GeForce GT 440 1024MB (830/900MHz), Audio: Analog Devices AD1984A

OS: Ubuntu 11.04, Kernel: 2.6.38-14-generic (x86_64), Desktop: GNOME 2.32.1, Display Server: X Server 1.10.1, Display Driver: NVIDIA 270.41.06, OpenGL: 4.1.0 NVIDIA 270.41.06, Compiler: GCC 4.5.2 + Clang 4.2.1, File-System: ext4, Screen Resolution: 1920x1080

System Notes: Compiz was running on this system. Intel SpeedStep was enabled.

BioCompOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E5620 @ 2.40GHz (8 Cores)Dell 0CRH6CIntel 5520 I/O + ICH10R12288MB1000GB Western Digital WDC WD10EALX-759NVIDIA GeForce GT 440 1024MB (830/900MHz)Analog Devices AD1984AUbuntu 11.042.6.38-14-generic (x86_64)GNOME 2.32.1X Server 1.10.1NVIDIA 270.41.064.1.0 NVIDIA 270.41.06GCC 4.5.2 + Clang 4.2.1ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionBioComp BenchmarksSystem Logs- Compiz was running on this system. Intel SpeedStep was enabled.

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search00148121620SE +/- 0.02, N = 313.99

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignment001246810SE +/- 0.05, N = 36.58

001

Processor: 2 x Intel Xeon E5620 @ 2.40GHz (8 Cores), Motherboard: Dell 0CRH6C, Chipset: Intel 5520 I/O + ICH10R, Memory: 12288MB, Disk: 1000GB Western Digital WDC WD10EALX-759, Graphics: NVIDIA GeForce GT 440 1024MB (830/900MHz), Audio: Analog Devices AD1984A

OS: Ubuntu 11.04, Kernel: 2.6.38-14-generic (x86_64), Desktop: GNOME 2.32.1, Display Server: X Server 1.10.1, Display Driver: NVIDIA 270.41.06, OpenGL: 4.1.0 NVIDIA 270.41.06, Compiler: GCC 4.5.2 + Clang 4.2.1, File-System: ext4, Screen Resolution: 1920x1080

System Notes: Compiz was running on this system. Intel SpeedStep was enabled.

Testing initiated at 3 May 2012 13:44 by user rengolin.