This test performs an alignment of 100 pyruvate decarboxylase sequences.
To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark mafft.
OpenBenchmarking.org metrics for this test profile configuration based on 1,622 public results since 26 September 2020 with the latest data as of 8 December 2024.
Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.
Based on OpenBenchmarking.org data, the selected test / test configuration (Timed MAFFT Alignment 7.471 - Multiple Sequence Alignment - LSU RNA) has an average run-time of 2 minutes. By default this test profile is set to run at least 3 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.
Based on public OpenBenchmarking.org results, the selected test / test configuration has an average standard deviation of 1.1%.
No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.
This benchmark has been successfully tested on the below mentioned architectures. The CPU architectures listed is where successful OpenBenchmarking.org result uploads occurred, namely for helping to determine if a given test is compatible with various alternative CPU architectures.
1 System - 1 Benchmark Result |
AMD Ryzen 7 3800X 8-Core - ASUS TUF GAMING X570-PLUS_BR - AMD Starship Linuxmint 22 - 6.8.0-38-generic - Cinnamon 6.2.7 |
2 Systems - 2 Benchmark Results |
AMD Ryzen 7 3800X 8-Core - ASUS TUF GAMING X570-PLUS_BR - AMD Starship Linuxmint 22 - 6.8.0-38-generic - Cinnamon 6.2.7 |
22 Systems - 3 Benchmark Results |
2 x Intel Xeon E5-2620 v2 - ASUS Z9PE-D8 WS - Intel Xeon E7 v2 CentOS Stream 9 - 5.14.0-496.el9.x86_64 - X Server |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Core i5-5200U - FF50 SATELLITE L50-C 06F2 - Intel Broadwell-U-OPI Ubuntu 24.04 - 6.8.0-48-generic - Clang 18.1.3 + GCC 13.2.0 |
1 System - 1 Benchmark Result |
Intel Xeon E3-1231 v3 - ASUS Z97-AR - Intel Xeon E3-1200 v3 DRAM Fedora 41 - 6.11.5-300.fc41.x86_64 - KDE Plasma 6.2.2 |
1 System - 10 Benchmark Results |
AMD Ryzen 5 4500U - LENOVO IdeaPad Flex 5 14ARE05 LNVNB161216 - AMD Renoir Ubuntu 22.04 - 6.8.0-47-generic - GNOME Shell 42.9 |
11 Systems - 217 Benchmark Results |
AMD Ryzen 9 3900XT 12-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship Ubuntu 20.04 - 5.9.0-050900-generic - GNOME Shell 3.36.4 |
4 Systems - 99 Benchmark Results |
VirtualApple - Apple Mac mini - 8GB macOS 11.0 - 20.1.0 - OpenCL 1.2 |
8 Systems - 439 Benchmark Results |
Intel Core i5-10600K - Gigabyte Z490 AORUS MASTER - Intel Comet Lake PCH Ubuntu 21.04 - 5.12.0-051200rc3daily20210315-generic - GNOME Shell 3.38.3 |
6 Systems - 143 Benchmark Results |
AMD Ryzen 9 5900X 12-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship Ubuntu 20.10 - 5.10.0-7.1-liquorix-amd64 - GNOME Shell 3.38.1 |
Featured Kernel Comparison |
AMD Ryzen 9 5950X 16-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship Ubuntu 20.10 - 5.10.9-051009-generic - GNOME Shell 3.38.1 |
3 Systems - 174 Benchmark Results |
Intel Core i9-10900K - Gigabyte Z490 AORUS MASTER - Intel Comet Lake PCH Fedora 32 - 5.6.6-300.fc32.x86_64 - GNOME Shell 3.36.1 |
2 Systems - 297 Benchmark Results |
AMD Ryzen Threadripper 3990X 64-Core - System76 Thelio Major - AMD Starship Pop 20.04 - 5.4.0-7642-generic - GNOME Shell 3.36.4 |
12 Systems - 229 Benchmark Results |
AMD Ryzen 5 5600X 6-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship Ubuntu 20.04 - 5.9.0-050900-generic - GNOME Shell 3.36.4 |
4 Systems - 513 Benchmark Results |
Intel Xeon E-2288G - Compulab SBC-ATCFL v1.2 - Intel Cannon Lake PCH Ubuntu 20.10 - 5.8.0-26-generic - GNOME Shell 3.38.1 |
3 Systems - 191 Benchmark Results |
AMD Ryzen 3 2200G - ASUS PRIME B350M-E - AMD Raven Ubuntu 20.10 - 5.8.0-38-generic - GNOME Shell 3.38.1 |
2 Systems - 403 Benchmark Results |
Intel Core i9-10900K - Gigabyte Z490 AORUS MASTER - Intel Comet Lake PCH Ubuntu 20.10 - 5.8.0-22-generic - GNOME Shell 3.38.0 |
11 Systems - 229 Benchmark Results |
AMD Ryzen 9 3900X 12-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship Ubuntu 20.04 - 5.9.0-050900-generic - GNOME Shell 3.36.4 |
4 Systems - 179 Benchmark Results |
AMD Ryzen 5 5600X 6-Core - ASRock X570 Taichi - AMD Starship Ubuntu 20.04 - 5.10.13-051013-lowlatency - GNOME Shell 3.36.4 |
3 Systems - 46 Benchmark Results |
AMD Ryzen Threadripper 3960X 24-Core - MSI Creator TRX40 - AMD Starship Ubuntu 20.04 - 5.9.0-rc5-14sep-patch - GNOME Shell 3.36.4 |
4 Systems - 35 Benchmark Results |
Apple M1 - Apple Mac mini - 8GB macOS 11.1 - 20.2.0 - OpenCL 1.2 |