ECP-CANDLE

The CANDLE benchmark codes implement deep learning architectures relevant to problems in cancer. These architectures address problems at different biological scales, specifically problems at the molecular, cellular and population scales.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark ecp-candle.

Source Repository

github.com

Test Created

12 August 2020

Last Updated

2 August 2021

Test Maintainer

Michael Larabel 

Test Type

System

Average Install Time

3 Minutes, 18 Seconds

Average Run Time

10 Minutes, 19 Seconds

Test Dependencies

Python

Accolades

5k+ Downloads

Supported Platforms


Public Result Uploads *Reported Installs **Reported Test Completions **Test Profile Page Views ***OpenBenchmarking.orgEventsECP-CANDLE Popularity Statisticspts/ecp-candle2020.082020.092020.102020.112020.122021.012021.022021.032021.042021.052021.062021.072021.082021.092021.102021.112021.1230060090012001500
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
*** Test profile page view reporting began March 2021.
Data current as of 4 December 2021.
P3B228.1%P3B134.9%P1B237.0%Benchmark Option PopularityOpenBenchmarking.org

Revision History

pts/ecp-candle-1.1.0   [View Source]   Mon, 02 Aug 2021 15:13:15 GMT
Update against ECP-CANDLE Benchmarks v0.4 upstream.

pts/ecp-candle-1.0.1   [View Source]   Sun, 23 Aug 2020 14:20:46 GMT
Drop P2B1 option as it seems borked for some systems.

pts/ecp-candle-1.0.0   [View Source]   Wed, 12 Aug 2020 18:15:02 GMT
Initial commit of CANDLE cancer deep learning benchmark.

Suites Using This Test

Machine Learning

HPC - High Performance Computing


Performance Metrics

Analyze Test Configuration:

ECP-CANDLE 0.4

Benchmark: P1B2

OpenBenchmarking.org metrics for this test profile configuration based on 166 public results since 2 August 2021 with the latest data as of 6 December 2021.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

OpenBenchmarking.orgDistribution Of Public Results - Benchmark: P1B2161 Results Range From 28 To 358 Seconds28466482100118136154172190208226244262280298316334352370306090120150

Based on OpenBenchmarking.org data, the selected test / test configuration (ECP-CANDLE 0.4 - Benchmark: P1B2) has an average run-time of 2 minutes. By default this test profile is set to run at least 1 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkBenchmark: P1B2Run-Time246810Min: 1 / Avg: 1.02 / Max: 2

Does It Scale Well With Increasing Cores?

No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

IntelAMDOpenBenchmarking.orgRelative Core Scaling To BaseECP-CANDLE CPU Core ScalingBenchmark: P1B246832640.40830.81661.22491.63322.0415

Recent Test Results

OpenBenchmarking.org Results Compare

2 Systems - 169 Benchmark Results

1 System - 169 Benchmark Results

3 Systems - 261 Benchmark Results

AMD Ryzen Threadripper 2990WX 32-Core - ASUS ROG ZENITH EXTREME - AMD 17h

Ubuntu 20.10 - 5.8.0-50-generic - GNOME Shell 3.38.1

3 Systems - 203 Benchmark Results

Intel Core i7-8086K - ASUS PRIME Z370-A - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc8daily20201009-generic - GNOME Shell 3.36.4

8 Systems - 364 Benchmark Results

2 x AMD EPYC 7742 64-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

1 System - 495 Benchmark Results

AMD EPYC 75F3 32-Core - ASRockRack ROME2D16-2T - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

3 Systems - 326 Benchmark Results

AMD EPYC 7742 64-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

4 Systems - 318 Benchmark Results

AMD EPYC 7F52 16-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

2 Systems - 149 Benchmark Results

AMD Ryzen 5 3600XT 6-Core - MSI X470 GAMING M7 AC - AMD Starship

Ubuntu 20.10 - 5.8.0-55-generic - GNOME Shell 3.38.1

3 Systems - 127 Benchmark Results

Intel Xeon E3-1280 v5 - MSI Z170A SLI PLUS - Intel Xeon E3-1200 v5

Ubuntu 20.04 - 5.13.0-051300-generic - GNOME Shell 3.36.9

3 Systems - 83 Benchmark Results

Intel Core i5-8400 - MSI Z370M MORTAR - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc7daily20200929-generic - GNOME Shell 3.36.4

3 Systems - 85 Benchmark Results

AMD Ryzen 7 3700X 8-Core - Gigabyte A320M-S2H-CF - AMD Starship

Ubuntu 20.04 - 5.8.1-050801-generic - GNOME Shell 3.36.4

3 Systems - 139 Benchmark Results

AMD Ryzen Threadripper 3960X 24-Core - MSI Creator TRX40 - AMD Starship

Ubuntu 20.04 - 5.12.0-051200rc2daily20210307-generic - GNOME Shell 3.36.4

Most Popular Test Results

OpenBenchmarking.org Results Compare

4 Systems - 196 Benchmark Results

Intel Core i7-8700K - ASUS TUF Z370-PLUS GAMING - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc6daily20200923-generic - GNOME Shell 3.36.4

4 Systems - 75 Benchmark Results

AMD FX-8150 Eight-Core - ASUS M5A78L-M LX PLUS - AMD RS780 + SB7x0

Ubuntu 20.10 - 5.8.0-53-generic - GNOME Shell 3.38.1

4 Systems - 146 Benchmark Results

Intel Core i5-7600K - Gigabyte Z270M-D3H-CF - Intel Xeon E3-1200 v6

Ubuntu 20.04 - 5.9.0-050900rc7daily20200928-generic - GNOME Shell 3.36.4

5 Systems - 34 Benchmark Results

2 x AMD EPYC 7763 64-Core - AMD DAYTONA_X - AMD Starship

Debian 11 - 5.10.0-8-amd64 - GNOME Shell 3.38.4

3 Systems - 68 Benchmark Results

Intel Xeon E3-1275 v6 - ASUS P10S-M WS - Intel Xeon E3-1200 v6

Ubuntu 20.04 - 5.9.0-050900rc8daily20201007-generic - X Server 1.20.8

4 Systems - 63 Benchmark Results

AMD Ryzen 9 3900XT 12-Core - MSI MEG X570 GODLIKE - AMD Starship

Ubuntu 20.10 - 5.11.0-rc1-phx - GNOME Shell 3.38.1

8 Systems - 364 Benchmark Results

2 x AMD EPYC 7742 64-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

5 Systems - 27 Benchmark Results

2 x Intel Xeon Platinum 8380 - Intel M50CYP2SB2U - Intel Device 0998

Ubuntu 20.04 - 5.14.0-rc1-folio - GNOME Shell 3.36.4

3 Systems - 3 Benchmark Results

AMD Ryzen 5 4500U - LENOVO LNVNB161216 - AMD Renoir Root Complex

Ubuntu 21.04 - 5.13.0-051300-generic - GNOME Shell 3.38.4

3 Systems - 3 Benchmark Results

AMD Ryzen 7 4700U - LENOVO LNVNB161216 - AMD Renoir Root Complex

Ubuntu 21.04 - 5.13.0-051300-generic - GNOME Shell 3.38.4

4 Systems - 8 Benchmark Results

AMD EPYC 7543 32-Core - TYAN S8036GM2NE-LE - AMD Starship

Ubuntu 21.04 - 5.11.0-25-generic - GNOME Shell 3.38.4

3 Systems - 22 Benchmark Results

Intel Core i5-10600K - ASUS PRIME Z490M-PLUS - Intel Comet Lake PCH

Ubuntu 20.10 - 5.11.0-051100rc2daily20210106-generic - GNOME Shell 3.38.1

3 Systems - 55 Benchmark Results

2 x AMD EPYC 7763 64-Core - AMD DAYTONA_X - AMD Starship

Ubuntu 20.10 - 5.8.0-29-generic - X Server 1.20.8

4 Systems - 30 Benchmark Results

AMD Ryzen Threadripper 3970X 32-Core - ASUS ROG ZENITH II EXTREME - AMD Starship

Ubuntu 20.10 - 5.11.0-rc6-phx - GNOME Shell 3.38.1

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