ECP-CANDLE

The CANDLE benchmark codes implement deep learning architectures relevant to problems in cancer. These architectures address problems at different biological scales, specifically problems at the molecular, cellular and population scales.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark ecp-candle.

Project Site

ecp-candle.github.io

Source Repository

github.com

Test Created

12 August 2020

Last Updated

2 August 2021

Test Maintainer

Michael Larabel 

Test Type

System

Average Install Time

3 Minutes, 44 Seconds

Average Run Time

10 Minutes, 19 Seconds

Test Dependencies

Python

Accolades

10k+ Downloads

Supported Platforms

Public Result Uploads *Reported Installs **Reported Test Completions **Test Profile Page Views ***OpenBenchmarking.orgEventsECP-CANDLE Popularity Statisticspts/ecp-candle2020.082020.092020.102020.112020.122021.012021.022021.032021.042021.052021.062021.072021.082021.092021.102021.112021.122022.012022.022022.032022.042022.052022.062022.072022.082022.092022.102022.112022.122023.012023.022023.032023.042023.052023.062023.072023.082023.092023.102023.112023.128001600240032004000
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
*** Test profile page view reporting began March 2021.
Data updated weekly as of 2 December 2023.
P3B226.8%P3B132.7%P1B240.5%Benchmark Option PopularityOpenBenchmarking.org

Revision History

pts/ecp-candle-1.1.0   [View Source]   Mon, 02 Aug 2021 15:13:15 GMT
Update against ECP-CANDLE Benchmarks v0.4 upstream.

pts/ecp-candle-1.0.1   [View Source]   Sun, 23 Aug 2020 14:20:46 GMT
Drop P2B1 option as it seems borked for some systems.

pts/ecp-candle-1.0.0   [View Source]   Wed, 12 Aug 2020 18:15:02 GMT
Initial commit of CANDLE cancer deep learning benchmark.

Suites Using This Test

Machine Learning

HPC - High Performance Computing


Performance Metrics

Analyze Test Configuration:

ECP-CANDLE 0.4

Benchmark: P1B2

OpenBenchmarking.org metrics for this test profile configuration based on 219 public results since 2 August 2021 with the latest data as of 4 August 2022.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

Component
Percentile Rank
# Compatible Public Results
Seconds (Average)
AMD EPYC 7373X 16-Core
95th
5
28
Intel Core i9-11900K
91st
5
29
Intel Core i7-12700K
90th
4
29 +/- 2
AMD Ryzen 7 5800X3D 8-Core
89th
5
29 +/- 1
AMD EPYC 75F3 32-Core
86th
12
30 +/- 3
AMD Ryzen 9 5900X 12-Core
81st
6
31 +/- 1
AMD EPYC 72F3 8-Core
80th
3
31 +/- 1
Mid-Tier
75th
> 32
Intel Core i7-1165G7
74th
3
32 +/- 2
2 x AMD EPYC 7373X 16-Core
74th
6
32
2 x AMD EPYC 75F3 32-Core
71st
16
33 +/- 2
AMD Ryzen Threadripper 3970X 32-Core
69th
3
34 +/- 1
AMD EPYC 7543 32-Core
68th
4
34
AMD Ryzen 7 5800X 8-Core
65th
3
35
Intel Core i7-1065G7
61st
4
36 +/- 1
AMD Ryzen Threadripper 3990X 64-Core
61st
6
36
Intel Core i5-10600K
53rd
3
37
AMD EPYC 7F52 16-Core
52nd
4
38
Median
50th
38
Intel Core i7-8086K
49th
3
38
Intel Core i7-8700K
48th
3
38 +/- 1
Intel Xeon E-2288G
48th
4
38
AMD Ryzen Threadripper 3960X 24-Core
47th
3
38 +/- 4
AMD Ryzen 9 5900HX
46th
6
39 +/- 2
2 x AMD EPYC 7763 64-Core
45th
8
40 +/- 3
Intel Core i9-10980XE
45th
4
40 +/- 2
2 x AMD EPYC 7773X 64-Core
42nd
3
41 +/- 1
AMD Ryzen 5 3600XT 6-Core
37th
4
42 +/- 1
AMD Ryzen Threadripper 2970WX 24-Core
33rd
3
43 +/- 1
Intel Xeon E3-1275 v6
33rd
3
43 +/- 1
2 x Intel Xeon Platinum 8380
33rd
4
44 +/- 3
AMD EPYC 7742 64-Core
31st
6
44
Intel Xeon Gold 6226R
29th
3
44
Low-Tier
25th
> 45
AMD Ryzen 7 3700X 8-Core
25th
3
45 +/- 1
Intel Core i5-8400
24th
4
45 +/- 1
AMD Ryzen 7 4700U
23rd
3
46 +/- 1
Intel Xeon E3-1280 v5
23rd
3
46 +/- 1
2 x Intel Xeon Platinum 8280
20th
3
46
Intel Core i7-10700T
18th
3
47 +/- 1
AMD Ryzen 5 4500U
17th
3
47 +/- 1
AMD Ryzen 5 5500U
16th
4
48 +/- 1
2 x AMD EPYC 7742 64-Core
15th
4
48
2 x Intel Xeon Gold 5220R
13th
3
48 +/- 1
Intel Core i7-8565U
10th
3
51
Intel Core i7-6800K
8th
3
52
Intel Core i7-8550U
6th
3
53 +/- 2
Intel Xeon E3-1235L v5
5th
3
60
Intel Xeon E5-2609 v4
4th
3
94 +/- 4
AMD FX-8150 Eight-Core
2nd
3
131 +/- 3
OpenBenchmarking.orgDistribution Of Public Results - Benchmark: P1B2219 Results Range From 20 To 358 Seconds2038567492110128146164182200218236254272290308326344362306090120150

Based on OpenBenchmarking.org data, the selected test / test configuration (ECP-CANDLE 0.4 - Benchmark: P1B2) has an average run-time of 2 minutes. By default this test profile is set to run at least 1 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkBenchmark: P1B2Run-Time246810Min: 1 / Avg: 1.01 / Max: 2

Does It Scale Well With Increasing Cores?

No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

IntelAMDOpenBenchmarking.orgRelative Core Scaling To BaseECP-CANDLE CPU Core ScalingBenchmark: P1B246832641280.41880.83761.25641.67522.094

Tested CPU Architectures

This benchmark has been successfully tested on the below mentioned architectures. The CPU architectures listed is where successful OpenBenchmarking.org result uploads occurred, namely for helping to determine if a given test is compatible with various alternative CPU architectures.

CPU Architecture
Kernel Identifier
Verified On
Intel / AMD x86 64-bit
x86_64
(Many Processors)

Recent Test Results

OpenBenchmarking.org Results Compare

1 System - 264 Benchmark Results

Intel Pentium Gold G6405 - ASRock H510M-HDV/M.2 SE - Intel Comet Lake PCH

Ubuntu 20.04 - 5.15.0-88-generic - GNOME Shell 3.36.9

1 System - 264 Benchmark Results

Intel Pentium Gold G6400 - ASRock H510M-HDV/M.2 SE - Intel Comet Lake PCH

Ubuntu 20.04 - 5.15.0-86-generic - GNOME Shell 3.36.9

1 System - 279 Benchmark Results

Intel Core i3-10105 - ASRock H510M-HDV/M.2 SE - Intel Comet Lake PCH

Ubuntu 20.04 - 5.15.0-83-generic - GNOME Shell 3.36.9

1 System - 279 Benchmark Results

Intel Core i3-10105 - ASRock H510M-HDV/M.2 SE - Intel Comet Lake PCH

Ubuntu 20.04 - 5.15.0-83-generic - GNOME Shell 3.36.9

1 System - 279 Benchmark Results

Intel Core i3-10105 - ASRock H510M-HDV/M.2 SE - Intel Comet Lake PCH

Ubuntu 20.04 - 5.15.0-83-generic - GNOME Shell 3.36.9

1 System - 543 Benchmark Results

AMD Ryzen Threadripper PRO 5995WX 64-Cores - ASRock WRX80 Creator - AMD Starship

Ubuntu 22.04 - 6.2.0-33-generic - GNOME Shell 42.9

1 System - 195 Benchmark Results

1 System - 195 Benchmark Results

1 System - 10 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 5 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 10 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 11 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 4 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 4 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

1 System - 8 Benchmark Results

AMD Ryzen 7 4800H - ASUS FA506IU v1.0 - AMD Renoir

openSUSE Tumbleweed 20230801 - 6.4.6-1-default - KDE Plasma

Most Popular Test Results

OpenBenchmarking.org Results Compare

4 Systems - 196 Benchmark Results

Intel Core i7-8700K - ASUS TUF Z370-PLUS GAMING - Intel 8th Gen Core

Ubuntu 20.04 - 5.9.0-050900rc6daily20200923-generic - GNOME Shell 3.36.4

1 System - 115 Benchmark Results

AMD Ryzen 9 5900HX - System76 Kudu - AMD Renoir

Pop 21.10 - 5.15.15-76051515-generic - GNOME Shell 40.5

4 Systems - 75 Benchmark Results

AMD FX-8150 Eight-Core - ASUS M5A78L-M LX PLUS - AMD RS780 + SB7x0

Ubuntu 20.10 - 5.8.0-53-generic - GNOME Shell 3.38.1

4 Systems - 63 Benchmark Results

AMD Ryzen 9 3900XT 12-Core - MSI MEG X570 GODLIKE - AMD Starship

Ubuntu 20.10 - 5.11.0-rc1-phx - GNOME Shell 3.38.1

5 Systems - 34 Benchmark Results

2 x AMD EPYC 7763 64-Core - AMD DAYTONA_X - AMD Starship

Debian 11 - 5.10.0-8-amd64 - GNOME Shell 3.38.4

3 Systems - 55 Benchmark Results

2 x AMD EPYC 7763 64-Core - AMD DAYTONA_X - AMD Starship

Ubuntu 20.10 - 5.8.0-29-generic - X Server 1.20.8

3 Systems - 261 Benchmark Results

AMD Ryzen Threadripper 2990WX 32-Core - ASUS ROG ZENITH EXTREME - AMD 17h

Ubuntu 20.10 - 5.8.0-50-generic - GNOME Shell 3.38.1

8 Systems - 364 Benchmark Results

2 x AMD EPYC 7742 64-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

5 Systems - 27 Benchmark Results

2 x Intel Xeon Platinum 8380 - Intel M50CYP2SB2U - Intel Device 0998

Ubuntu 20.04 - 5.14.0-rc1-folio - GNOME Shell 3.36.4

3 Systems - 68 Benchmark Results

Intel Xeon E3-1275 v6 - ASUS P10S-M WS - Intel Xeon E3-1200 v6

Ubuntu 20.04 - 5.9.0-050900rc8daily20201007-generic - X Server 1.20.8

3 Systems - 326 Benchmark Results

AMD EPYC 7742 64-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

4 Systems - 318 Benchmark Results

AMD EPYC 7F52 16-Core - Supermicro H11DSi-NT v2.00 - AMD Starship

Ubuntu 21.10 - 5.13.0-19-generic - GNOME Shell 40.5

4 Systems - 146 Benchmark Results

Intel Core i5-7600K - Gigabyte Z270M-D3H-CF - Intel Xeon E3-1200 v6

Ubuntu 20.04 - 5.9.0-050900rc7daily20200928-generic - GNOME Shell 3.36.4
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