mafft-1.6.2-fno-use-default-alignment

mafft-1.6.2-fno-use-default-alignment

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2403115-NE-MAFFT162F98
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mafft-1.6.2-fno-use-default-alignment
March 12
  2 Minutes

mafft-1.6.2-fno-use-default-alignment

Processor: Intel Core i5-10500 @ 3.10GHz (6 Cores), Motherboard: Dell 0NDYHG (1.25.0 BIOS), Chipset: Intel Tiger Lake-H, Memory: 8GB, Disk: PC SN730 NVMe WDC 256GB + 1000GB MB001000GWFGF + 0GB SD Card Reader, Graphics: Intel CometLake-S GT2 [UHD 630] (1150MHz), Audio: Realtek ALC3246, Network: Intel

OS: Debian 12, Kernel: 6.1.0-13-amd64 (x86_64), Display Server: X Server 1.21.1.7, Compiler: GCC 12.2.0, File-System: ext4

Kernel Notes: Transparent Huge Pages: always
Environment Notes: LDFLAGS=-latomic
Processor Notes: Scaling Governor: intel_pstate performance (EPP: performance) - CPU Microcode: 0xf8
Security Notes: gather_data_sampling: Mitigation of Microcode + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Mitigation of Clear buffers; SMT disabled + retbleed: Mitigation of Enhanced IBRS + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Mitigation of Microcode + tsx_async_abort: Not affected

mafft-1.6.2-fno-use-default-alignmentOpenBenchmarking.orgPhoronix Test SuiteIntel Core i5-10500 @ 3.10GHz (6 Cores)Dell 0NDYHG (1.25.0 BIOS)Intel Tiger Lake-H8GBPC SN730 NVMe WDC 256GB + 1000GB MB001000GWFGF + 0GB SD Card ReaderIntel CometLake-S GT2 [UHD 630] (1150MHz)Realtek ALC3246IntelDebian 126.1.0-13-amd64 (x86_64)X Server 1.21.1.7GCC 12.2.0ext4ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDisplay ServerCompilerFile-SystemMafft-1.6.2-fno-use-default-alignment BenchmarksSystem Logs- Transparent Huge Pages: always- LDFLAGS=-latomic- Scaling Governor: intel_pstate performance (EPP: performance) - CPU Microcode: 0xf8- gather_data_sampling: Mitigation of Microcode + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Mitigation of Clear buffers; SMT disabled + retbleed: Mitigation of Enhanced IBRS + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Mitigation of Microcode + tsx_async_abort: Not affected

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNAmafft-1.6.2-fno-use-default-alignment612182430SE +/- 0.24, N = 326.651. (CC) clang options: -std=c99 -O3 -latomic -lm -lpthread

mafft-1.6.2-fno-use-default-alignment

Processor: Intel Core i5-10500 @ 3.10GHz (6 Cores), Motherboard: Dell 0NDYHG (1.25.0 BIOS), Chipset: Intel Tiger Lake-H, Memory: 8GB, Disk: PC SN730 NVMe WDC 256GB + 1000GB MB001000GWFGF + 0GB SD Card Reader, Graphics: Intel CometLake-S GT2 [UHD 630] (1150MHz), Audio: Realtek ALC3246, Network: Intel

OS: Debian 12, Kernel: 6.1.0-13-amd64 (x86_64), Display Server: X Server 1.21.1.7, Compiler: GCC 12.2.0, File-System: ext4

Kernel Notes: Transparent Huge Pages: always
Environment Notes: LDFLAGS=-latomic
Processor Notes: Scaling Governor: intel_pstate performance (EPP: performance) - CPU Microcode: 0xf8
Security Notes: gather_data_sampling: Mitigation of Microcode + itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Mitigation of Clear buffers; SMT disabled + retbleed: Mitigation of Enhanced IBRS + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Mitigation of Microcode + tsx_async_abort: Not affected

Testing initiated at 12 March 2024 02:09 by user lucian.