x12gromacs

2 x Intel Xeon Platinum 8380 testing with a Supermicro X12DPU-6 (1.4 BIOS) and ASPEED on Ubuntu 22.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2301249-NE-X12GROMAC04
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
2023-01-25 01:03
January 25
  2 Minutes


x12gromacsOpenBenchmarking.orgPhoronix Test Suite 10.8.42 x Intel Xeon Platinum 8380 @ 2.30GHz (80 Cores / 160 Threads)Supermicro X12DPU-6 (1.4 BIOS)Intel Device 099816 x 64 GB DDR4-3200MT/s HMAA8GR7AJR4N-XN4001GB INTEL SSDPE7KX040T7ASPEED2 x Mellanox MT2894 + 4 x Intel E810-C for QSFPUbuntu 22.045.15.0-58-generic (x86_64)1.2.204GCC 11.3.0ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelVulkanCompilerFile-SystemScreen ResolutionX12gromacs PerformanceSystem Logs- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-serialization=2 --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-11-xKiWfi/gcc-11-11.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-11-xKiWfi/gcc-11-11.3.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_cpufreq schedutil - CPU Microcode: 0xd000375- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Mitigation of Clear buffers; SMT vulnerable + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Not affected + tsx_async_abort: Not affected

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing with the water_GMX50 data. This test profile allows selecting between CPU and GPU-based GROMACS builds. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2022.1Implementation: MPI CPU - Input: water_GMX50_bare2023-01-25 01:033691215SE +/- 0.049, N = 39.2491. (CXX) g++ options: -O3