namd-test

AMD Ryzen 7 3800XT 8-Core testing with a ASRock X570S PG Riptide (P2.20 BIOS) and NVIDIA RTX A2000 6GB on Debian via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2301024-NE-NAMDTEST822
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Result
Identifier
View Logs
Performance Per
Dollar
Date
Run
  Test
  Duration
NVIDIA RTX A2000
January 03 2023
  5 Minutes


namd-testOpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen 7 3800XT 8-Core @ 3.90GHz (8 Cores / 16 Threads)ASRock X570S PG Riptide (P2.20 BIOS)AMD Starship/Matisse64GB512GB ADATA SX8200PNP + 1000GB Samsung SSD 980 PRO 1TB + 500GB Western Digital WDS500G1B0A-NVIDIA RTX A2000 6GBNVIDIA GA106 HD AudioMi MonitorRealtek Killer E3000 2.5GbE + Intel 7265Debian6.0.0-6-amd64 (x86_64)KDE Plasma 5.26.4X Server 1.21.1.5NVIDIA 525.60.134.6.0OpenCL 3.0 CUDA 12.0.89GCC 12.2.0 + CUDA 11.6ext43440x1440ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLOpenCLCompilerFile-SystemScreen ResolutionNamd-test BenchmarksSystem Logs- Transparent Huge Pages: always- Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x8701021- BAR1 / Visible vRAM Size: 8192 MiB - vBIOS Version: 94.06.2c.00.12- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Mitigation of untrained return thunk; SMT enabled with STIBP protection + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Retpolines IBPB: conditional STIBP: always-on RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

NAMD CUDA

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. This version of the NAMD test profile uses CUDA GPU acceleration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.14ATPase Simulation - 327,506 AtomsNVIDIA RTX A20000.05210.10420.15630.20840.2605SE +/- 0.00061, N = 30.23145