mantahmmer

2 x Intel Xeon Gold 6248R testing with a TYAN S7106GM2NR-HOV-B (V8.108 BIOS) and ASPEED on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2201240-NE-MANTAHMME34
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
performance
January 24 2022
  7 Minutes


mantahmmerOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon Gold 6248R @ 4.00GHz (48 Cores / 96 Threads)TYAN S7106GM2NR-HOV-B (V8.108 BIOS)Intel Sky Lake-E DMI3 Registers12 x 16384 MB DDR4-3200MT/s Samsung M393A2K43DB3-CWE2 x 1920GB SAMSUNG MZQLB1T9HAJR-00007 + 2 x 480GB INTEL SSDSC2BB48ASPEED2 x Mellanox MT27800 + 2 x Mellanox MT27710Ubuntu 20.045.4.0-96-generic (x86_64)1.0.2GCC 9.3.0ext4800x600ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelVulkanCompilerFile-SystemScreen ResolutionMantahmmer BenchmarksSystem Logs- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate performance (EPP: performance) - CPU Microcode: 0x5003103- itlb_multihit: KVM: Vulnerable + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Vulnerable + spectre_v1: Vulnerable: __user pointer sanitization and usercopy barriers only; no swapgs barriers + spectre_v2: Vulnerable IBPB: disabled STIBP: disabled + srbds: Not affected + tsx_async_abort: Vulnerable

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Searchperformance306090120150SE +/- 0.27, N = 3136.091. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi