Parallel Bioindormatic

Intel Core i7-3615QM testing with a Apple Mac-C3EC7CD22292981F (421.0.0.0.0 BIOS) and NVIDIA GeForce GT 650M 1GB on Ubuntu 21.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2106212-IB-2104297HA80
Jump To Table - Results

View

Do Not Show Noisy Results
Do Not Show Results With Incomplete Data
Do Not Show Results With Little Change/Spread
List Notable Results

Limit displaying results to tests within:

Bioinformatics 2 Tests
C/C++ Compiler Tests 2 Tests
CPU Massive 2 Tests
HPC - High Performance Computing 2 Tests
Scientific Computing 2 Tests

Statistics

Show Overall Harmonic Mean(s)
Show Overall Geometric Mean
Show Geometric Means Per-Suite/Category
Show Wins / Losses Counts (Pie Chart)
Normalize Results
Remove Outliers Before Calculating Averages

Graph Settings

Force Line Graphs Where Applicable
Convert To Scalar Where Applicable
Prefer Vertical Bar Graphs

Additional Graphs

Show Perf Per Core/Thread Calculation Graphs Where Applicable

Table

Show Detailed System Result Table

Run Management

Highlight
Result
Hide
Result
Result
Identifier
View Logs
Performance Per
Dollar
Date
Run
  Test
  Duration
Musl Stable cmang 11.1.0
April 29 2021
  30 Minutes
Ubuntu 21.04 miti GCC 10.3
June 21 2021
  5 Minutes
Invert Hiding All Results Option
  17 Minutes
Only show results matching title/arguments (delimit multiple options with a comma):
Do not show results matching title/arguments (delimit multiple options with a comma):


Parallel BioindormaticProcessorMotherboardMemoryDiskGraphicsChipsetAudioMonitorNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem LayerDesktopDisplay ServerDisplay DriverOpenGLOpenCLVulkanMusl Stable cmang 11.1.0Ubuntu 21.04 miti GCC 10.3Intel Core i7-3615QM (8 Cores)Parallels Software Virtual (16.1.2 49151 BIOS)4096MB69GB Gentoo-Musl-0 SSvirtio_gpudrmfbGentoo/Linux5.10.27-gentoo-x86_64-gcc (x86_64)GCC 10.2.0ext41008x759Parallels VirtualizationIntel Core i7-3615QM @ 3.30GHz (4 Cores / 8 Threads)Apple Mac-C3EC7CD22292981F (421.0.0.0.0 BIOS)Intel 3rd Gen Core DRAM8GB251GB APPLE SSD SM256ENVIDIA GeForce GT 650M 1GBCirrus Logic CS4206Color LCDBroadcom NetXtreme BCM57786 PCIe + Broadcom NetXtreme BCM57762 PCIe + Broadcom BCM4331 802.11a/b/g/nUbuntu 21.045.11.0-18-generic (x86_64)MATE 1.24.1X Server 1.20.11NVIDIA 460.804.6.0OpenCL 1.2 CUDA 11.2.1621.2.155GCC 10.3.0 + Clang 12.0.0-1ubuntu1 + LLVM 12.0.0zfs2880x1800OpenBenchmarking.orgKernel Details- Musl Stable cmang 11.1.0: Transparent Huge Pages: always- Ubuntu 21.04 miti GCC 10.3: Transparent Huge Pages: madviseCompiler Details- Musl Stable cmang 11.1.0: --bindir=/usr/x86_64-gentoo-linux-musl/gcc-bin/10.2.0 --build=x86_64-gentoo-linux-musl --datadir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/10.2.0 --disable-fixed-point --disable-libada --disable-libsanitizer --disable-libssp --disable-libstdcxx-pch --disable-libvtv --disable-multilib --disable-nls --disable-systemtap --disable-vtable-verify --disable-werror --enable-__cxa_atexit --enable-checking=release --enable-default-pie --enable-default-ssp --enable-esp --enable-languages=c,c++,fortran --enable-libgomp --enable-libstdcxx-time --enable-lto --enable-obsolete --enable-secureplt --enable-shared --enable-targets=all --enable-threads=posix --host=x86_64-gentoo-linux-musl --includedir=/usr/lib/gcc/x86_64-gentoo-linux-musl/10.2.0/include --mandir=/usr/share/gcc-data/x86_64-gentoo-linux-musl/10.2.0/man --with-multilib-list=m64 --with-python-dir=/share/gcc-data/x86_64-gentoo-linux-musl/10.2.0/python --with-zstd --without-isl - Ubuntu 21.04 miti GCC 10.3: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-link-mutex --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-10-gDeRY6/gcc-10-10.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-10-gDeRY6/gcc-10-10.3.0/debian/tmp-gcn/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-build-config=bootstrap-lto-lean --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v Processor Details- Musl Stable cmang 11.1.0: CPU Microcode: 0x21- Ubuntu 21.04 miti GCC 10.3: Scaling Governor: intel_cpufreq performance - CPU Microcode: 0x21 - Thermald 2.4.3Security Details- Musl Stable cmang 11.1.0: itlb_multihit: KVM: Mitigation of VMX unsupported + l1tf: Mitigation of PTE Inversion + mds: Vulnerable: Clear buffers attempted no microcode; SMT Host state unknown + meltdown: Mitigation of PTI + spec_store_bypass: Vulnerable + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline STIBP: disabled RSB filling + srbds: Unknown: Dependent on hypervisor status + tsx_async_abort: Not affected - Ubuntu 21.04 miti GCC 10.3: itlb_multihit: KVM: Mitigation of VMX disabled + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Vulnerable: No microcode + tsx_async_abort: Not affected

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.471Multiple Sequence Alignment - LSU RNAMusl Stable cmang 11.1.070140210280350SE +/- 3.50, N = 5317.091. (CC) gcc options: -std=c99 -O3 -lm -lpthread

Himeno Benchmark

The Himeno benchmark is a linear solver of pressure Poisson using a point-Jacobi method. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverMusl Stable cmang 11.1.0Ubuntu 21.04 miti GCC 10.35001000150020002500SE +/- 19.80, N = 3SE +/- 27.68, N = 42205.422474.351. (CC) gcc options: -O3
OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverMusl Stable cmang 11.1.0Ubuntu 21.04 miti GCC 10.3400800120016002000Min: 2167.21 / Avg: 2205.42 / Max: 2233.54Min: 2410.79 / Avg: 2474.35 / Max: 2527.851. (CC) gcc options: -O3