AMD Ryzen 7 3700X 8-Core testing with a ASRock X570 Phantom Gaming-ITX/TB3 (P2.80 BIOS) and Zotac NVIDIA GeForce RTX 2060 SUPER 8GB on Ubuntu 20.10 via the Phoronix Test Suite.
Compare your own system(s) to this result file with the
Phoronix Test Suite by running the command:
phoronix-test-suite benchmark 2101188-HA-20210117B63 20210117 bioinformatics - Phoronix Test Suite 20210117 bioinformatics AMD Ryzen 7 3700X 8-Core testing with a ASRock X570 Phantom Gaming-ITX/TB3 (P2.80 BIOS) and Zotac NVIDIA GeForce RTX 2060 SUPER 8GB on Ubuntu 20.10 via the Phoronix Test Suite.
HTML result view exported from: https://openbenchmarking.org/result/2101188-HA-20210117B63&grs .
20210117 bioinformatics Processor Motherboard Chipset Memory Disk Graphics Audio Network OS Kernel Display Server Display Driver OpenCL Vulkan Compiler File-System Screen Resolution AMD Ryzen 7 3700X 8-Core AMD Ryzen 7 3700X 8-Core @ 3.60GHz (8 Cores / 16 Threads) ASRock X570 Phantom Gaming-ITX/TB3 (P2.80 BIOS) AMD Starship/Matisse 32GB 500GB Western Digital WDS500G3X0C-00SJG0 + 4 x 2000GB Seagate ST2000LM015-2E81 Zotac NVIDIA GeForce RTX 2060 SUPER 8GB NVIDIA TU106 HD Audio Intel I211 + Intel Wi-Fi 6 AX200 Ubuntu 20.10 5.8.0-38-lowlatency (x86_64) X Server 1.20.9 modesetting 1.20.9 OpenCL 1.2 CUDA 11.2.109 1.2.155 GCC 10.2.0 + CUDA 11.0 btrfs 640x480 OpenBenchmarking.org - --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-10-JvwpWM/gcc-10-10.2.0/debian/tmp-gcn/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0x8701021 - itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected
20210117 bioinformatics himeno: Poisson Pressure Solver mafft: Multiple Sequence Alignment - LSU RNA hmmer: Pfam Database Search qmcpack: mrbayes: Primate Phylogeny Analysis AMD Ryzen 7 3700X 8-Core 4911.105888 10.362 92.883 580.41 83.327 OpenBenchmarking.org
Himeno Benchmark Poisson Pressure Solver OpenBenchmarking.org MFLOPS, More Is Better Himeno Benchmark 3.0 Poisson Pressure Solver AMD Ryzen 7 3700X 8-Core 1100 2200 3300 4400 5500 SE +/- 62.25, N = 3 4911.11 1. (CC) gcc options: -O3 -mavx2
Timed MAFFT Alignment Multiple Sequence Alignment - LSU RNA OpenBenchmarking.org Seconds, Fewer Is Better Timed MAFFT Alignment 7.471 Multiple Sequence Alignment - LSU RNA AMD Ryzen 7 3700X 8-Core 3 6 9 12 15 SE +/- 0.06, N = 3 10.36 1. (CC) gcc options: -std=c99 -O3 -lm -lpthread
Timed HMMer Search Pfam Database Search OpenBenchmarking.org Seconds, Fewer Is Better Timed HMMer Search 3.3.1 Pfam Database Search AMD Ryzen 7 3700X 8-Core 20 40 60 80 100 SE +/- 0.15, N = 3 92.88 1. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm
QMCPACK OpenBenchmarking.org Total Execution Time - Seconds, Fewer Is Better QMCPACK 3.8 AMD Ryzen 7 3700X 8-Core 130 260 390 520 650 580.41 1. (CXX) g++ options: -fopenmp -fomit-frame-pointer -finline-limit=1000 -fstrict-aliasing -funroll-all-loops -march=native -O3 -ffast-math -lm
Timed MrBayes Analysis Primate Phylogeny Analysis OpenBenchmarking.org Seconds, Fewer Is Better Timed MrBayes Analysis 3.2.7 Primate Phylogeny Analysis AMD Ryzen 7 3700X 8-Core 20 40 60 80 100 SE +/- 2.47, N = 15 86.42 1. (CC) gcc options: -mmmx -msse -msse2 -msse3 -mssse3 -msse4.1 -msse4.2 -msse4a -msha -maes -mavx -mfma -mavx2 -mrdrnd -mbmi -mbmi2 -madx -mabm -O3 -std=c99 -pedantic -lm
Phoronix Test Suite v10.8.4