namd-cuda-1

Intel Core i7-10750H testing with a Notebook PCX0DX (1.07.03 BIOS) and NVIDIA GeForce RTX 2070 with Max-Q Design 8GB on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2009214-NE-NAMDCUDA177
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std
September 21 2020
  1 Minute


namd-cuda-1OpenBenchmarking.orgPhoronix Test SuiteIntel Core i7-10750H @ 5.00GHz (6 Cores / 12 Threads)Notebook PCX0DX (1.07.03 BIOS)Intel Comet Lake PCH64GB2 x 512GB GIGABYTE GP-GSM2NE3512GNTD + 8GB Flash DiskNVIDIA GeForce RTX 2070 with Max-Q Design 8GB (300/405MHz)Realtek ALC1220Realtek RTL8111/8168/8411 + Intel Wi-Fi 6 AX200Ubuntu 20.045.4.0-47-generic (x86_64)GNOME Shell 3.36.4X Server 1.20.8NVIDIA 450.51.06GCC 9.3.0 + CUDA 11.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionNamd-cuda-1 BenchmarksSystem Logs- Scaling Governor: intel_pstate powersave - CPU Microcode: 0xc8- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected

NAMD CUDA

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. This version of the NAMD test profile uses CUDA GPU acceleration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.14ATPase Simulation - 327,506 Atomsstd0.05150.1030.15450.2060.2575SE +/- 0.00201, N = 30.22867