NAMD 8280 2P

2 x Intel Xeon Platinum 8280 testing with a GIGABYTE MD61-SC2-00 v01000100 (T15 BIOS) and llvmpipe on Ubuntu 20.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2009011-FI-NAMD8280216
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Result
Identifier
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Performance Per
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Date
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  Test
  Duration
2 x Intel Xeon Platinum 8280
September 01 2020
  2 Minutes

2 x Intel Xeon Platinum 8280

Processor: 2 x Intel Xeon Platinum 8280 @ 4.00GHz (56 Cores / 112 Threads), Motherboard: GIGABYTE MD61-SC2-00 v01000100 (T15 BIOS), Chipset: Intel Sky Lake-E DMI3 Registers, Memory: 378GB, Disk: 280GB INTEL SSDPED1D280GA, Graphics: llvmpipe, Monitor: VE228, Network: 2 x Intel X722 for 1GbE + 2 x QLogic FastLinQ QL41000 10/25/40/50GbE

OS: Ubuntu 20.04, Kernel: 5.4.0-21-generic (x86_64), Desktop: GNOME Shell 3.36.1, Display Server: X Server 1.20.8, Display Driver: modesetting 1.20.8, OpenGL: 3.3 Mesa 20.0.4 (LLVM 9.0.1 256 bits), Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave - CPU Microcode: 0x500002c
Security Notes: itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + tsx_async_abort: Mitigation of TSX disabled

NAMD 8280 2POpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon Platinum 8280 @ 4.00GHz (56 Cores / 112 Threads)GIGABYTE MD61-SC2-00 v01000100 (T15 BIOS)Intel Sky Lake-E DMI3 Registers378GB280GB INTEL SSDPED1D280GAllvmpipeVE2282 x Intel X722 for 1GbE + 2 x QLogic FastLinQ QL41000 10/25/40/50GbEUbuntu 20.045.4.0-21-generic (x86_64)GNOME Shell 3.36.1X Server 1.20.8modesetting 1.20.83.3 Mesa 20.0.4 (LLVM 9.0.1 256 bits)GCC 9.3.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionNAMD 8280 2P BenchmarksSystem Logs- Scaling Governor: intel_pstate powersave - CPU Microcode: 0x500002c- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + tsx_async_abort: Mitigation of TSX disabled

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms2 x Intel Xeon Platinum 82800.08250.1650.24750.330.4125SE +/- 0.00096, N = 30.36686

2 x Intel Xeon Platinum 8280

Processor: 2 x Intel Xeon Platinum 8280 @ 4.00GHz (56 Cores / 112 Threads), Motherboard: GIGABYTE MD61-SC2-00 v01000100 (T15 BIOS), Chipset: Intel Sky Lake-E DMI3 Registers, Memory: 378GB, Disk: 280GB INTEL SSDPED1D280GA, Graphics: llvmpipe, Monitor: VE228, Network: 2 x Intel X722 for 1GbE + 2 x QLogic FastLinQ QL41000 10/25/40/50GbE

OS: Ubuntu 20.04, Kernel: 5.4.0-21-generic (x86_64), Desktop: GNOME Shell 3.36.1, Display Server: X Server 1.20.8, Display Driver: modesetting 1.20.8, OpenGL: 3.3 Mesa 20.0.4 (LLVM 9.0.1 256 bits), Compiler: GCC 9.3.0, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: intel_pstate powersave - CPU Microcode: 0x500002c
Security Notes: itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + tsx_async_abort: Mitigation of TSX disabled

Testing initiated at 1 September 2020 18:05 by user phoronix.