intel_hmmer

Intel Xeon W-1270 testing with a Intel CometLake S UDIMM (ERB/CRB) v1 (CMLSFWR1.R00.1513.D00.1912200346 BIOS) and EFI VGA on Ubuntu 19.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2003113-VE-INTELHMME17
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
w1270_hmmer
January 03
  1 Minute


intel_hmmerOpenBenchmarking.orgPhoronix Test SuiteIntel Xeon W-1270 @ 4.90GHz (8 Cores / 16 Threads)Intel CometLake S UDIMM (ERB/CRB) v1 (CMLSFWR1.R00.1513.D00.1912200346 BIOS)Intel Device 06ef4 x 16384 MB DDR4-3200MT/s Micron 16ATF2G64AZ-3G2J1240GB CT240BX500SSD1EFI VGARealtek ALC711Intel Device 0d4d + Intel Device 15f2Ubuntu 19.045.0.0-38-generic (x86_64)GCC 8.3.0ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelCompilerFile-SystemScreen ResolutionIntel_hmmer BenchmarksSystem Logs- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-bootstrap --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate powersave - CPU Microcode: 0xc4- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling + tsx_async_abort: Not affected

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchw1270_hmmer0.86541.73082.59623.46164.327SE +/- 0.034, N = 113.846