NAMD_cuda_results

Intel Core i7-9750H testing with a LENOVO LNVNB161216 (BHCN29WW BIOS) and NVIDIA GeForce RTX 2060 6GB on Ubuntu 18.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1912306-HU-NAMDCUDAR48
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
namd_cuda_t1
December 30 2019
  2 Minutes


NAMD_cuda_resultsOpenBenchmarking.orgPhoronix Test SuiteIntel Core i7-9750H @ 4.50GHz (6 Cores / 12 Threads)LENOVO LNVNB161216 (BHCN29WW BIOS)Intel Cannon Lake PCH32768MB1024GB INTEL SSDPEKKW010T8LNVIDIA GeForce RTX 2060 6GB (960/7000MHz)Realtek ALC257DELL U2715HRealtek RTL8111/8168/8411 + Intel-AC 9560Ubuntu 18.045.0.0-37-generic (x86_64)GNOME Shell 3.28.4X Server 1.20.4NVIDIA 440.444.6.0GCC 7.4.0ext44480x1440ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionNAMD_cuda_results PerformanceSystem Logs- Scaling Governor: intel_pstate powersave - CPU Microcode: 0xca- itlb_multihit: KVM: Mitigation of Split huge pages + l1tf: Mitigation of PTE Inversion; VMX: conditional cache flushes SMT vulnerable + mds: Mitigation of Clear buffers; SMT vulnerable + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full generic retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + tsx_async_abort: Not affected

NAMD CUDA

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. This version of the NAMD test profile uses CUDA GPU acceleration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.13ATPase Simulation - 327,506 Atomsnamd_cuda_t10.06820.13640.20460.27280.341SE +/- 0.00380, N = 30.30312