testNAMD

AMD Ryzen 5 2600 Six-Core testing with a Gigabyte B450M DS3H-CF (F3 BIOS) and Gigabyte NVIDIA GeForce GTX 1660 6GB on LinuxMint 19.1 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1905284-HV-TESTNAMD613
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Result
Identifier
Performance Per
Dollar
Date
Run
  Test
  Duration
namd
May 28 2019
  2 Minutes

namd

Processor: AMD Ryzen 5 2600 Six-Core @ 3.40GHz (6 Cores / 12 Threads), Motherboard: Gigabyte B450M DS3H-CF (F3 BIOS), Chipset: AMD 17h, Memory: 16384MB, Disk: 480GB CT480BX500SSD1 + 2000GB Seagate ST2000DM008-2FR1, Graphics: Gigabyte NVIDIA GeForce GTX 1660 6GB (1530/4001MHz), Audio: NVIDIA Device 1aeb, Monitor: MP59G, Network: Realtek RTL8111/8168/8411

OS: LinuxMint 19.1, Kernel: 4.15.0-50-generic (x86_64), Desktop: Xfce 4.12, Display Server: X Server 1.19.6, Display Driver: NVIDIA 430.14, OpenGL: 4.6.0, Compiler: GCC 7.4.0 + CUDA 10.1, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: acpi-cpufreq ondemand
Security Notes: __user pointer sanitization + Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + SSB disabled via prctl and seccomp

testNAMDOpenBenchmarking.orgPhoronix Test SuiteAMD Ryzen 5 2600 Six-Core @ 3.40GHz (6 Cores / 12 Threads)Gigabyte B450M DS3H-CF (F3 BIOS)AMD 17h16384MB480GB CT480BX500SSD1 + 2000GB Seagate ST2000DM008-2FR1Gigabyte NVIDIA GeForce GTX 1660 6GB (1530/4001MHz)NVIDIA Device 1aebMP59GRealtek RTL8111/8168/8411LinuxMint 19.14.15.0-50-generic (x86_64)Xfce 4.12X Server 1.19.6NVIDIA 430.144.6.0GCC 7.4.0 + CUDA 10.1ext41920x1080ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionTestNAMD BenchmarksSystem Logs- Scaling Governor: acpi-cpufreq ondemand- __user pointer sanitization + Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + SSB disabled via prctl and seccomp

NAMD CUDA

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. This version of the NAMD test profile uses CUDA GPU acceleration. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD CUDA 2.13ATPase Simulation - 327,506 Atomsnamd0.07560.15120.22680.30240.378SE +/- 0.00326, N = 30.33580

namd

Processor: AMD Ryzen 5 2600 Six-Core @ 3.40GHz (6 Cores / 12 Threads), Motherboard: Gigabyte B450M DS3H-CF (F3 BIOS), Chipset: AMD 17h, Memory: 16384MB, Disk: 480GB CT480BX500SSD1 + 2000GB Seagate ST2000DM008-2FR1, Graphics: Gigabyte NVIDIA GeForce GTX 1660 6GB (1530/4001MHz), Audio: NVIDIA Device 1aeb, Monitor: MP59G, Network: Realtek RTL8111/8168/8411

OS: LinuxMint 19.1, Kernel: 4.15.0-50-generic (x86_64), Desktop: Xfce 4.12, Display Server: X Server 1.19.6, Display Driver: NVIDIA 430.14, OpenGL: 4.6.0, Compiler: GCC 7.4.0 + CUDA 10.1, File-System: ext4, Screen Resolution: 1920x1080

Processor Notes: Scaling Governor: acpi-cpufreq ondemand
Security Notes: __user pointer sanitization + Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + SSB disabled via prctl and seccomp

Testing initiated at 28 May 2019 08:33 by user marc-pc.