panda_namd

r620_namd

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r620_namd
February 24 2019
  4 Minutes

r620_namd

Processor: 2 x Intel Xeon E5-2690 0 (16 Cores / 32 Threads), Motherboard: Dell 01W23F (2.2.2 BIOS), Chipset: Intel Xeon E5/Core, Memory: 8 x 16384 MB DDR3-1600MHz M393B2G70DB0-YK0, Disk: 107GB PERC H710P + 2591GB PERC H710P, Graphics: Matrox G200eR2, Network: 4 x Broadcom NetXtreme BCM5720 PCIe + Mellanox MT27500 Family

OS: CentOS Linux 7, Kernel: 3.10.0-862.14.4.el7.x86_64 (x86_64), Compiler: GCC 8.2.0, File-System: xfs, Screen Resolution: 1024x768

Security Notes: KPTI + Load fences __user pointer sanitization + Full retpoline + SSB disabled via prctl and seccomp + PTE Inversion; VMX: SMT vulnerable L1D conditional cache flushes

panda_namdOpenBenchmarking.orgPhoronix Test Suite2 x Intel Xeon E5-2690 0 (16 Cores / 32 Threads)Dell 01W23F (2.2.2 BIOS)Intel Xeon E5/Core8 x 16384 MB DDR3-1600MHz M393B2G70DB0-YK0107GB PERC H710P + 2591GB PERC H710PMatrox G200eR24 x Broadcom NetXtreme BCM5720 PCIe + Mellanox MT27500 FamilyCentOS Linux 73.10.0-862.14.4.el7.x86_64 (x86_64)GCC 8.2.0xfs1024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionPanda_namd BenchmarksSystem Logs- KPTI + Load fences __user pointer sanitization + Full retpoline + SSB disabled via prctl and seccomp + PTE Inversion; VMX: SMT vulnerable L1D conditional cache flushes

NAMD

NAMD is a parallel molecular dynamics code designed for high-performance simulation of large biomolecular systems. NAMD was developed by the Theoretical and Computational Biophysics Group in the Beckman Institute for Advanced Science and Technology at the University of Illinois at Urbana-Champaign. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.13b1ATPase Simulation - 327,506 Atomsr620_namd0.30990.61980.92971.23961.5495SE +/- 0.00672, N = 31.37729

r620_namd

Processor: 2 x Intel Xeon E5-2690 0 (16 Cores / 32 Threads), Motherboard: Dell 01W23F (2.2.2 BIOS), Chipset: Intel Xeon E5/Core, Memory: 8 x 16384 MB DDR3-1600MHz M393B2G70DB0-YK0, Disk: 107GB PERC H710P + 2591GB PERC H710P, Graphics: Matrox G200eR2, Network: 4 x Broadcom NetXtreme BCM5720 PCIe + Mellanox MT27500 Family

OS: CentOS Linux 7, Kernel: 3.10.0-862.14.4.el7.x86_64 (x86_64), Compiler: GCC 8.2.0, File-System: xfs, Screen Resolution: 1024x768

Security Notes: KPTI + Load fences __user pointer sanitization + Full retpoline + SSB disabled via prctl and seccomp + PTE Inversion; VMX: SMT vulnerable L1D conditional cache flushes

Testing initiated at 24 February 2019 10:36 by user .