Timed MAFFT Alignment

Oracle VirtualBox testing on Ubuntu 16.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1902100-KH-TIMEDMAFF79
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Result
Identifier
Performance Per
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Date
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  Test
  Duration
mafft
February 10 2019
 

mafft

Processor: Intel Core i5-6200U @ 2.40GHz (1 Core), Motherboard: Oracle VirtualBox v1.2, Chipset: Intel 440FX- 82441FX PMC, Memory: 2048MB, Disk: 43GB VBOX HDD, Graphics: LLVMpipe, Audio: Intel 82801AA AC 97 Audio, Monitor: VBOX monitor, Network: Intel 82540EM Gigabit

OS: Ubuntu 16.04, Kernel: 4.13.0-43-generic (x86_64), Desktop: Unity 7.4.0, Display Driver: modesetting 1.19.3, OpenGL: 3.3 Mesa 17.0.7 Gallium 0.4, Compiler: GCC 5.4.0 20160609, File-System: ext4, Screen Resolution: 1360x703, System Layer: Oracle VirtualBox

Environment Notes: LIBGL_ALWAYS_SOFTWARE=1
Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
System Notes: This was running on battery power.

Timed MAFFT AlignmentOpenBenchmarking.orgPhoronix Test SuiteIntel Core i5-6200U @ 2.40GHz (1 Core)Oracle VirtualBox v1.2Intel 440FX- 82441FX PMC2048MB43GB VBOX HDDLLVMpipeIntel 82801AA AC 97 AudioVBOX monitorIntel 82540EM GigabitUbuntu 16.044.13.0-43-generic (x86_64)Unity 7.4.0modesetting 1.19.33.3 Mesa 17.0.7 Gallium 0.4GCC 5.4.0 20160609ext41360x703Oracle VirtualBoxProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionSystem LayerTimed MAFFT Alignment BenchmarksSystem Logs- LIBGL_ALWAYS_SOFTWARE=1- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - This was running on battery power.

Timed MAFFT Alignment

This test performs an alignment of 100 pyruvate decarboxylase sequences. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 7.392Multiple Sequence Alignmentmafft612182430SE +/- 0.59, N = 627.241. (CC) gcc options: -std=c99 -O3 -lm -lpthread

mafft

Processor: Intel Core i5-6200U @ 2.40GHz (1 Core), Motherboard: Oracle VirtualBox v1.2, Chipset: Intel 440FX- 82441FX PMC, Memory: 2048MB, Disk: 43GB VBOX HDD, Graphics: LLVMpipe, Audio: Intel 82801AA AC 97 Audio, Monitor: VBOX monitor, Network: Intel 82540EM Gigabit

OS: Ubuntu 16.04, Kernel: 4.13.0-43-generic (x86_64), Desktop: Unity 7.4.0, Display Driver: modesetting 1.19.3, OpenGL: 3.3 Mesa 17.0.7 Gallium 0.4, Compiler: GCC 5.4.0 20160609, File-System: ext4, Screen Resolution: 1360x703, System Layer: Oracle VirtualBox

Environment Notes: LIBGL_ALWAYS_SOFTWARE=1
Compiler Notes: --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v
System Notes: This was running on battery power.

Testing initiated at 10 February 2019 14:25 by user paolag.