mafftlog

UltraSparc T2 testing on Debian 7.8 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1605036-TOGU-150324512
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mafftPowerNV
March 24 2015
 
mafftT2
May 03 2016
 
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mafftPowerNV

Processor: POWER8E @ 3.69GHz (160 Cores), Motherboard: PowerNV 8284-22A, Memory: 196608MB, Disk: 284GB IPR-0 5D80D100 + 4 x 118GB 1746 FAStT, Network: Broadcom NetXtreme BCM5719 Gigabit PCIe

OS: Ubuntu 15.04, Kernel: 3.19.0-10-generic (ppc64le), Compiler: GCC 4.9.2, File-System: ext4

Compiler Notes: --build=powerpc64le-linux-gnu --disable-browser-plugin --disable-libquadmath --disable-libsanitizer --disable-libsanitizer --disable-multilib --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-secureplt --enable-shared --enable-targets=powerpcle-linux --enable-threads=posix --host=powerpc64le-linux-gnu --target=powerpc64le-linux-gnu --with-arch-directory=ppc64 --with-cpu=power7 --with-long-double-128 --with-tune=power8 -v
Processor Notes: Scaling Governor: powernv-cpufreq ondemand

mafftT2

Processor: UltraSparc T2 (64 Cores), Chipset: PLX PEX 8533 32-lane 6-port, Memory: 32768MB, Disk: 2 x 147GB Seagate ST914603SSUN146G, Network: Intel 82571EB Gigabit

OS: Debian 7.8, Kernel: 3.2.0-4-sparc64-smp (sparc64), Compiler: GCC 4.6.3, File-System: ext4

Compiler Notes: --build=sparc-linux-gnu --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-targets=all --enable-threads=posix --host=sparc-linux-gnu --target=sparc-linux-gnu --with-long-double-128 -v

mafftlogProcessorMotherboardMemoryDiskNetworkChipsetOSKernelCompilerFile-SystemmafftPowerNVmafftT2POWER8E @ 3.69GHz (160 Cores)PowerNV 8284-22A196608MB284GB IPR-0 5D80D100 + 4 x 118GB 1746 FAStTBroadcom NetXtreme BCM5719 Gigabit PCIeUbuntu 15.043.19.0-10-generic (ppc64le)GCC 4.9.2ext4UltraSparc T2 (64 Cores)PLX PEX 8533 32-lane 6-port32768MB2 x 147GB Seagate ST914603SSUN146GIntel 82571EB GigabitDebian 7.83.2.0-4-sparc64-smp (sparc64)GCC 4.6.3OpenBenchmarking.orgCompiler Details- mafftPowerNV: --build=powerpc64le-linux-gnu --disable-browser-plugin --disable-libquadmath --disable-libsanitizer --disable-libsanitizer --disable-multilib --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-secureplt --enable-shared --enable-targets=powerpcle-linux --enable-threads=posix --host=powerpc64le-linux-gnu --target=powerpc64le-linux-gnu --with-arch-directory=ppc64 --with-cpu=power7 --with-long-double-128 --with-tune=power8 -v - mafftT2: --build=sparc-linux-gnu --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-targets=all --enable-threads=posix --host=sparc-linux-gnu --target=sparc-linux-gnu --with-long-double-128 -v Processor Details- mafftPowerNV: Scaling Governor: powernv-cpufreq ondemand

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentmafftPowerNVmafftT2714212835SE +/- 0.20, N = 6SE +/- 1.14, N = 64.2629.131. (CC) gcc options: -O3 -lm -lpthread
OpenBenchmarking.orgSeconds x Core, Fewer Is BetterTimed MAFFT Alignment 6.864Performance Per Core - Multiple Sequence AlignmentmafftPowerNVmafftT2400800120016002000681.601864.321. mafftPowerNV: Detected core count of 1602. mafftT2: Detected core count of 64
OpenBenchmarking.orgSeconds x Thread, Fewer Is BetterTimed MAFFT Alignment 6.864Performance Per Thread - Multiple Sequence AlignmentmafftPowerNVmafftT2400800120016002000681.601864.321. mafftPowerNV: Detected thread count of 1602. mafftT2: Detected thread count of 64
OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentmafftPowerNVmafftT2612182430Min: 3.76 / Avg: 4.26 / Max: 4.95Min: 25.08 / Avg: 29.13 / Max: 32.321. (CC) gcc options: -O3 -lm -lpthread