eval

affinitas239

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Bioinformatics 3 Tests
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a239_03
May 23 2012
 
edb2_00
May 24 2012
 
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June 04 2012
 
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June 04 2012
 
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eval - Phoronix Test Suite

eval

affinitas239

HTML result view exported from: https://openbenchmarking.org/result/1206045-BY-1205242AR16&grr&rdt.

evalProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolutiona239_03edb2_00edb2_01edb2_02Intel Core i5-2520M @ 2.50GHz (4 Cores)LENOVO 417429GIntel 2nd Generation Core Family DRAM8192MB320GB HITACHI HTS72323LLVMpipeConexant CX20590E222WIntel 82579LM Gigabit Connection + Intel Centrino Advanced-N 6205Ubuntu 12.043.2.0-24-generic (x86_64)KDE 4.8.2X Server 1.11.3intel 2.17.02.1 Mesa 8.0.2 Gallium 0.4GCC 4.6ext41680x10502 x Intel Xeon E5649 @ 2.53GHz (24 Cores)HP ProLiant DL360 G7Intel 5520 I/O + ICH1064512MB147GB LOGICAL VOLUME + 600GB LOGICAL VOLUME + 2 x 3299GB OPEN-VATI ES1000Broadcom NetXtreme II BCM5709 GigabitRed Hat Enterprise Linux Server 6.2 (Santiago)2.6.32-220.13.1.el6.x86_64 (x86_64)GCC 4.4.6 20110731ext31024x768OpenBenchmarking.orgSystem Details- a239_03: Disk Scheduler: CFQ. Firefox and Thunderbird were running on this system.Compiler Details- edb2_00, edb2_01, edb2_02: --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic Disk Mount Options Details- edb2_00, edb2_01, edb2_02: acl,barrier=1,data=ordered,errors=continue,relatime,rw,user_xattr

evalnpb: MG.Bnpb: LU.Anpb: IS.Cnpb: EP.Bcompress-pbzip2: 256MB File Compressioncompress-lzma: 256MB File Compressionffmpeg: AVI To NTSC VCDencode-mp3: WAV To MP3hmmer: Pfam Database Searchhimeno: Poisson Pressure Solvermafft: Multiple Sequence Alignmentjohn-the-ripper: Blowfishopenssl: RSA 4096-bit Performancegraphics-magick: HWB Color Spacephpbench: PHP Benchmark Suitecrafty: Elapsed Timepovray: Total Timec-ray: Total Timeiozone: 4GB - Read Performanceiozone: 4GB - Write Performancepostmark: Disk Transaction Performancepgbench: TPC-B Transactions Per Secondapache: Static Web Page Servingnginx: Static Web Page Servingstream: Triadstream: Addstream: Scalestream: Copya239_03edb2_00edb2_01edb2_02680.261638.31143.6491.1322.93174.7112.6617.1348.071213.6212.51186874.051267764896.49828120.495684.0460.674166153.3013254.2418682.923720.613651.283346.883356.2763.114.56157.6414.7022.9411.621121.445.79456744.9012367721102.7897324.814394.5290.4321831280.632269.472065.361408.221875.91419.421970.5272.09369.214.62159.6014.7221.2511.751107.935.73387245.0812667580102.4593524.104310.74122.54227220091.1916142.573282.602966.222238.022607.50455.994488.9965.31366.604.61151.6614.6121.2211.451116.205.85409845.0312867619101.3494024.093687.79121.1121551219.3819959.2016291.443361.033704.092736.553160.98OpenBenchmarking.org

NAS Parallel Benchmarks

Test / Class: MG.B

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: MG.Ba239_03edb2_01edb2_02150300450600750SE +/- 179.53, N = 6SE +/- 8.38, N = 3SE +/- 42.83, N = 6680.26419.42455.991. (F9X) gfortran options: -fopenmp

NAS Parallel Benchmarks

Test / Class: LU.A

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: LU.Aa239_03edb2_01edb2_0210002000300040005000SE +/- 431.46, N = 6SE +/- 648.14, N = 6SE +/- 2330.76, N = 61638.311970.524488.991. (F9X) gfortran options: -fopenmp

NAS Parallel Benchmarks

Test / Class: IS.C

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: IS.Ca239_03edb2_00edb2_01edb2_02306090120150SE +/- 2.74, N = 3SE +/- 0.11, N = 3SE +/- 4.11, N = 6SE +/- 1.27, N = 3143.6463.1172.0965.31

NAS Parallel Benchmarks

Test / Class: EP.B

OpenBenchmarking.orgTotal Mop/s, More Is BetterNAS Parallel Benchmarks 3.3Test / Class: EP.Ba239_03edb2_01edb2_0280160240320400SE +/- 0.23, N = 3SE +/- 5.76, N = 6SE +/- 4.96, N = 391.13369.21366.601. (F9X) gfortran options: -fopenmp

Parallel BZIP2 Compression

256MB File Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterParallel BZIP2 Compression 1.0.5256MB File Compressiona239_03edb2_00edb2_01edb2_02510152025SE +/- 0.41, N = 3SE +/- 0.11, N = 6SE +/- 0.16, N = 6SE +/- 0.07, N = 422.934.564.624.611. (CXX) g++ options: -O2 -pthread -lpthread -lbz2

LZMA Compression

256MB File Compression

OpenBenchmarking.orgSeconds, Fewer Is BetterLZMA Compression256MB File Compressiona239_03edb2_00edb2_01edb2_024080120160200SE +/- 2.32, N = 3SE +/- 3.25, N = 6SE +/- 2.06, N = 3SE +/- 0.14, N = 3174.71157.64159.60151.661. (CC) gcc options: -O2

FFmpeg

AVI To NTSC VCD

OpenBenchmarking.orgSeconds, Fewer Is BetterFFmpeg 0.10AVI To NTSC VCDa239_03edb2_00edb2_01edb2_0248121620SE +/- 0.17, N = 6SE +/- 0.06, N = 3SE +/- 0.06, N = 3SE +/- 0.00, N = 312.6614.7014.7214.611. (CC) gcc options: -lavdevice -lavfilter -lavformat -lavcodec -lswresample -lswscale -lavutil -ldl -lm -pthread -lbz2

LAME MP3 Encoding

WAV To MP3

OpenBenchmarking.orgSeconds, Fewer Is BetterLAME MP3 Encoding 3.99.3WAV To MP3a239_03edb2_00edb2_01edb2_02510152025SE +/- 0.27, N = 10SE +/- 1.60, N = 10SE +/- 0.02, N = 5SE +/- 0.01, N = 517.1322.9421.2521.22

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searcha239_03edb2_00edb2_01edb2_021122334455SE +/- 9.27, N = 6SE +/- 0.13, N = 3SE +/- 0.18, N = 3SE +/- 0.03, N = 348.0711.6211.7511.451. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Himeno Benchmark

Poisson Pressure Solver

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure Solvera239_03edb2_00edb2_01edb2_0230060090012001500SE +/- 24.00, N = 6SE +/- 0.49, N = 3SE +/- 6.66, N = 3SE +/- 7.58, N = 31213.621121.441107.931116.201. (CC) gcc options: -O3

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmenta239_03edb2_00edb2_01edb2_023691215SE +/- 0.19, N = 3SE +/- 0.10, N = 3SE +/- 0.09, N = 3SE +/- 0.17, N = 612.515.795.735.851. (CC) gcc options: -O3 -lm -lpthread

John The Ripper

Blowfish

OpenBenchmarking.orgReal C/S, More Is BetterJohn The Ripper 1.7.9Blowfisha239_03edb2_00edb2_01edb2_0210002000300040005000SE +/- 21.65, N = 3SE +/- 605.20, N = 6SE +/- 35.44, N = 3SE +/- 69.93, N = 418684567387240981. (CC) gcc options: -fopenmp -lcrypt

OpenSSL

RSA 4096-bit Performance

OpenBenchmarking.orgSigns Per Second, More Is BetterOpenSSL 1.0.0eRSA 4096-bit Performancea239_03edb2_00edb2_01edb2_021632486480SE +/- 0.30, N = 4SE +/- 0.17, N = 4SE +/- 0.03, N = 4SE +/- 0.05, N = 474.0544.9045.0845.031. (CC) gcc options: -m64 -O3 -lssl -lcrypto -ldl

GraphicsMagick

Operation: HWB Color Space

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.12Operation: HWB Color Spacea239_03edb2_00edb2_01edb2_02306090120150SE +/- 0.33, N = 3SE +/- 3.86, N = 6SE +/- 2.19, N = 3SE +/- 1.33, N = 31261231261281. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lX11 -lbz2 -lxml2 -lz -lm -lgomp -lpthread

PHPBench

PHP Benchmark Suite

OpenBenchmarking.orgScore, More Is BetterPHPBench 0.8.1PHP Benchmark Suitea239_03edb2_00edb2_01edb2_0217K34K51K68K85KSE +/- 454.58, N = 3SE +/- 176.10, N = 3SE +/- 124.06, N = 3SE +/- 64.09, N = 377648677216758067619

Crafty

Elapsed Time

OpenBenchmarking.orgSeconds, Fewer Is BetterCrafty 23.4Elapsed Timea239_03edb2_00edb2_01edb2_0220406080100SE +/- 0.07, N = 3SE +/- 1.14, N = 3SE +/- 1.03, N = 3SE +/- 0.08, N = 396.49102.78102.45101.341. (CC) gcc options: -lstdc++ -lm

POV-Ray

Total Time

OpenBenchmarking.orgSeconds, Fewer Is BetterPOV-Ray 3.6.1Total Timea239_03edb2_00edb2_01edb2_0220040060080010008289739359401. (CXX) g++ options: -pipe -O3 -msse -mfpmath=sse -msse2 -march=k8 -mtune=k8 -malign-double -lz -lm

C-Ray

Total Time

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total Timea239_03edb2_00edb2_01edb2_02306090120150SE +/- 0.25, N = 3SE +/- 0.41, N = 4SE +/- 0.04, N = 3SE +/- 0.04, N = 3120.4924.8124.1024.091. (CC) gcc options: -lm -lpthread -O3

IOzone

Size: 4GB - Disk Test: Read Performance

OpenBenchmarking.orgMB/s, More Is BetterIOzone 3.405Size: 4GB - Disk Test: Read Performancea239_03edb2_00edb2_01edb2_0212002400360048006000SE +/- 271.82, N = 6SE +/- 306.64, N = 6SE +/- 71.72, N = 3SE +/- 392.54, N = 65684.044394.524310.743687.791. (CC) gcc options: -O3

IOzone

Size: 4GB - Disk Test: Write Performance

OpenBenchmarking.orgMB/s, More Is BetterIOzone 3.405Size: 4GB - Disk Test: Write Performancea239_03edb2_00edb2_01edb2_02306090120150SE +/- 1.73, N = 6SE +/- 0.27, N = 3SE +/- 0.19, N = 3SE +/- 0.11, N = 360.6790.43122.54121.111. (CC) gcc options: -O3

PostMark

Disk Transaction Performance

OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction Performancea239_03edb2_00edb2_01edb2_029001800270036004500SE +/- 0.00, N = 5SE +/- 142.94, N = 10SE +/- 0.00, N = 5SE +/- 61.17, N = 104166218322722155

PostgreSQL pgbench

TPC-B Transactions Per Second

OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per Seconda239_03edb2_00edb2_0230060090012001500SE +/- 0.78, N = 3SE +/- 19.15, N = 3SE +/- 15.41, N = 3153.301280.631219.381. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm

Apache Benchmark

Static Web Page Serving

OpenBenchmarking.orgRequests Per Second, More Is BetterApache Benchmark 2.2.21Static Web Page Servinga239_03edb2_01edb2_024K8K12K16K20KSE +/- 183.70, N = 3SE +/- 182.96, N = 3SE +/- 330.41, N = 313254.2420091.1919959.201. (CC) gcc options: -O2 -pthread -lm -lrt -lcrypt -lpthread

NGINX Benchmark

Static Web Page Serving

OpenBenchmarking.orgRequests Per Second, More Is BetterNGINX Benchmark 1.0.11Static Web Page Servinga239_03edb2_01edb2_024K8K12K16K20KSE +/- 136.23, N = 3SE +/- 153.46, N = 3SE +/- 245.10, N = 618682.9216142.5716291.441. (CC) gcc options: -lpthread -lcrypt -lcrypto -lz

Stream

Type: Triad

OpenBenchmarking.orgMB/s, More Is BetterStream 2009-04-11Type: Triada239_03edb2_00edb2_01edb2_028001600240032004000SE +/- 278.69, N = 20SE +/- 135.07, N = 20SE +/- 703.31, N = 20SE +/- 948.75, N = 203720.612269.473282.603361.031. (CC) gcc options: -O2 -fopenmp

Stream

Type: Add

OpenBenchmarking.orgMB/s, More Is BetterStream 2009-04-11Type: Adda239_03edb2_00edb2_01edb2_028001600240032004000SE +/- 279.68, N = 20SE +/- 116.38, N = 20SE +/- 650.58, N = 20SE +/- 876.51, N = 203651.282065.362966.223704.091. (CC) gcc options: -O2 -fopenmp

Stream

Type: Scale

OpenBenchmarking.orgMB/s, More Is BetterStream 2009-04-11Type: Scalea239_03edb2_00edb2_01edb2_027001400210028003500SE +/- 250.39, N = 20SE +/- 75.31, N = 20SE +/- 689.97, N = 20SE +/- 892.77, N = 203346.881408.222238.022736.551. (CC) gcc options: -O2 -fopenmp

Stream

Type: Copy

OpenBenchmarking.orgMB/s, More Is BetterStream 2009-04-11Type: Copya239_03edb2_00edb2_01edb2_027001400210028003500SE +/- 257.62, N = 20SE +/- 303.14, N = 20SE +/- 733.49, N = 20SE +/- 1017.79, N = 203356.271875.912607.503160.981. (CC) gcc options: -O2 -fopenmp

Phoronix Test Suite v10.8.4