ubuntu-1204-ni-s7-computational-bio

AMD Athlon 64 X2 4600+ testing with a MSI MS-7309 v1.0 and ATI Radeon HD 4600 512MB on Ubuntu 12.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1210200-SU-UBUNTU12051.

ubuntu-1204-ni-s7-computational-bioProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolutionni1AMD Athlon 64 X2 4600+ @ 2.41GHz (2 Cores)MSI MS-7309 v1.0NVIDIA MCP612048MB1000GB Hitachi HDT72101ATI Radeon HD 4600 512MBRealtek ALC888VA2248Ubuntu 12.043.2.0-32-generic-pae (i686)Unity 5.16.0X Server 1.11.3fglrx 8.96.43.3.11627GCC 4.6ext31920x1080OpenBenchmarking.org- --build=i686-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-targets=all --enable-threads=posix --host=i686-linux-gnu --target=i686-linux-gnu --with-arch-32=i686 --with-tune=generic -v - Compiz was running on this system.

ubuntu-1204-ni-s7-computational-biohmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisni170.0933.7072.50OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchni11632486480SE +/- 0.17, N = 370.091. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentni1816243240SE +/- 0.56, N = 333.701. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

Primate Phylogeny Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysisni11632486480SE +/- 0.11, N = 372.50

Phoronix Test Suite v10.8.4