pts-computational-biology

2 x AMD Opteron 6212 testing with a Supermicro H8DG6/H8DGi v1.0 and Matrox MGA G200eW WPCM450 1024MB on Ubuntu 12.04 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1207305-AR-PTSCOMPUT12
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Date
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fake-raid
July 31 2012
 
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fake-raid

Processor: 2 x AMD Opteron 6212 @ 2.60GHz (16 Cores), Motherboard: Supermicro H8DG6/H8DGi v1.0, Chipset: AMD nee ATI RD890 + SB7x0/SB8x0/SB9x0, Memory: 32768MB, Disk: 160GB Western Digital WD1600AAJS-7 + 2 x 2000GB Seagate ST32000645NS, Graphics: Matrox MGA G200eW WPCM450 1024MB (810/600MHz), Audio: NVIDIA GPU 1c HDMI/DP, Monitor: DELL 1901FP, Network: Intel 82576 Gigabit Connection

OS: Ubuntu 12.04, Kernel: 3.2.0-27-generic (x86_64), Desktop: Unity 2D 5.12.0, Display Server: X Server 1.11.3, Display Driver: nouveau 0.0.16, Compiler: GCC 4.6, File-System: ext4, Screen Resolution: 1280x1024

pts-computational-biologyOpenBenchmarking.orgPhoronix Test Suite2 x AMD Opteron 6212 @ 2.60GHz (16 Cores)Supermicro H8DG6/H8DGi v1.0AMD nee ATI RD890 + SB7x0/SB8x0/SB9x032768MB160GB Western Digital WD1600AAJS-7 + 2 x 2000GB Seagate ST32000645NSMatrox MGA G200eW WPCM450 1024MB (810/600MHz)NVIDIA GPU 1c HDMI/DPDELL 1901FPIntel 82576 Gigabit ConnectionUbuntu 12.043.2.0-27-generic (x86_64)Unity 2D 5.12.0X Server 1.11.3nouveau 0.0.16GCC 4.6ext41280x1024ProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverCompilerFile-SystemScreen ResolutionPts-computational-biology BenchmarksSystem Logs

Timed HMMer Search

This test searches through the Pfam database of profile hidden markov models. The search finds the domain structure of Drosophila Sevenless protein. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchfake-raid48121620SE +/- 0.10, N = 314.45

Timed MAFFT Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentfake-raid246810SE +/- 0.07, N = 37.96

Timed MrBayes Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysisfake-raid816243240SE +/- 0.12, N = 335.87

fake-raid

Processor: 2 x AMD Opteron 6212 @ 2.60GHz (16 Cores), Motherboard: Supermicro H8DG6/H8DGi v1.0, Chipset: AMD nee ATI RD890 + SB7x0/SB8x0/SB9x0, Memory: 32768MB, Disk: 160GB Western Digital WD1600AAJS-7 + 2 x 2000GB Seagate ST32000645NS, Graphics: Matrox MGA G200eW WPCM450 1024MB (810/600MHz), Audio: NVIDIA GPU 1c HDMI/DP, Monitor: DELL 1901FP, Network: Intel 82576 Gigabit Connection

OS: Ubuntu 12.04, Kernel: 3.2.0-27-generic (x86_64), Desktop: Unity 2D 5.12.0, Display Server: X Server 1.11.3, Display Driver: nouveau 0.0.16, Compiler: GCC 4.6, File-System: ext4, Screen Resolution: 1280x1024

Testing initiated at 31 July 2012 02:18 by user user.