nwubi_bio

Intel Xeon E5520 testing with a Dell 0K095G and NVIDIA Quadro NVS 295 512MB on Ubuntu 12.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1206011-BY-NWUBIBIO504.

nwubi_bioProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen Resolutionbio1Intel Xeon E5520 @ 2.27GHz (8 Cores)Dell 0K095GIntel 5520/5500/X58 + ICH10R6144MB750GB Western Digital WD7501AALS-7NVIDIA Quadro NVS 295 512MB (540/702MHz)Analog Devices AD1984ABroadcom NetXtreme BCM5761 Gigabit PCIeUbuntu 12.043.2.0-24-generic (x86_64)Unity 5.12.0X Server 1.11.3NVIDIA 295.403.3.0 NVIDIA 295.40GCC 4.6ext41680x1050OpenBenchmarking.org- --build=x86_64-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i686 --with-tune=generic -v - Compiz was running on this system.

nwubi_biohmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysisbio118.659.6024.04OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchbio1510152025SE +/- 0.10, N = 318.651. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentbio13691215SE +/- 0.23, N = 69.601. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

Primate Phylogeny Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysisbio1612182430SE +/- 0.02, N = 324.04

Phoronix Test Suite v10.8.4