PyHPC Benchmarks

PyHPC-Benchmarks is a suite of Python high performance computing benchmarks for execution on CPUs and GPUs using various popular Python HPC libraries. The PyHPC CPU-based benchmarks focus on sequential CPU performance.

To run this test with the Phoronix Test Suite, the basic command is: phoronix-test-suite benchmark pyhpc.

Project Site

github.com

Test Created

22 October 2021

Last Updated

28 October 2021

Test Maintainer

Michael Larabel 

Test Type

System

Average Install Time

3 Minutes, 18 Seconds

Average Run Time

49 Seconds

Test Dependencies

Python

Accolades

5k+ Downloads

Supported Platforms


Public Result Uploads *Reported Installs **Reported Test Completions **Test Profile Page ViewsOpenBenchmarking.orgEventsPyHPC Benchmarks Popularity Statisticspts/pyhpc2021.102021.112021.122022.012022.022022.032022.042022.052022.062022.072022.082022.092022.102022.112022.124K8K12K16K20K
* Uploading of benchmark result data to OpenBenchmarking.org is always optional (opt-in) via the Phoronix Test Suite for users wishing to share their results publicly.
** Data based on those opting to upload their test results to OpenBenchmarking.org and users enabling the opt-in anonymous statistics reporting while running benchmarks from an Internet-connected platform.
Data current as of 5 December 2022.
JAX15.3%Numba17.6%Aesara17.5%TensorFlow8.4%PyTorch15.8%Numpy25.4%Backend Option PopularityOpenBenchmarking.org
104857620.1%1638416.4%26214418.0%6553617.4%419430428.0%Project Size Option PopularityOpenBenchmarking.org
Isoneutral Mixing47.0%Equation of State53.0%Benchmark Option PopularityOpenBenchmarking.org

Revision History

pts/pyhpc-3.0.0   [View Source]   Thu, 28 Oct 2021 15:13:30 GMT
Update against upstream PyHPC 3.0.

pts/pyhpc-1.0.0   [View Source]   Fri, 22 Oct 2021 15:05:19 GMT
Initial commit of PyHPC-Benchmarks.

Suites Using This Test

HPC - High Performance Computing

Python


Performance Metrics

Analyze Test Configuration:

PyHPC Benchmarks 3.0

Device: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of State

OpenBenchmarking.org metrics for this test profile configuration based on 441 public results since 28 October 2021 with the latest data as of 29 November 2022.

Below is an overview of the generalized performance for components where there is sufficient statistically significant data based upon user-uploaded results. It is important to keep in mind particularly in the Linux/open-source space there can be vastly different OS configurations, with this overview intended to offer just general guidance as to the performance expectations.

Component
Percentile Rank
# Compatible Public Results
Seconds (Average)
99th
6
0.747 +/- 0.015
98th
6
0.749 +/- 0.008
97th
5
0.751 +/- 0.002
96th
8
0.758 +/- 0.008
91st
7
0.832 +/- 0.003
90th
12
0.843 +/- 0.068
87th
10
0.922 +/- 0.085
84th
10
0.954 +/- 0.080
80th
4
0.981 +/- 0.011
78th
5
0.993 +/- 0.043
77th
5
1.001 +/- 0.007
Mid-Tier
75th
> 1.004
73rd
7
1.016 +/- 0.008
72nd
5
1.020 +/- 0.026
69th
8
1.027 +/- 0.012
69th
8
1.027 +/- 0.040
65th
9
1.055 +/- 0.026
61st
7
1.105 +/- 0.008
56th
3
1.245 +/- 0.017
54th
8
1.271 +/- 0.062
54th
9
1.277 +/- 0.076
51st
4
1.312 +/- 0.014
Median
50th
1.313
50th
6
1.315 +/- 0.013
49th
4
1.327 +/- 0.012
49th
5
1.329 +/- 0.014
49th
16
1.330 +/- 0.134
44th
6
1.362 +/- 0.021
41st
3
1.413 +/- 0.008
38th
3
1.456 +/- 0.018
37th
6
1.460 +/- 0.007
36th
5
1.472 +/- 0.006
35th
6
1.520 +/- 0.179
32nd
5
1.547 +/- 0.008
32nd
7
1.554 +/- 0.022
31st
5
1.561 +/- 0.021
30th
9
1.574 +/- 0.012
27th
4
1.584 +/- 0.015
Low-Tier
25th
> 1.639
25th
4
1.650 +/- 0.138
25th
3
1.677 +/- 0.005
24th
3
1.683 +/- 0.002
19th
6
1.876 +/- 0.028
16th
3
1.976 +/- 0.001
15th
3
2.014 +/- 0.266
14th
4
2.060 +/- 0.153
14th
8
2.074 +/- 0.115
14th
3
2.076 +/- 0.004
13th
4
2.089 +/- 0.053
12th
3
2.118 +/- 0.003
9th
3
2.200 +/- 0.039
8th
4
2.438 +/- 0.007
6th
6
2.456 +/- 0.019
5th
3
2.489 +/- 0.016
5th
3
2.658 +/- 0.067
4th
3
2.681 +/- 0.016
3rd
3
2.755 +/- 0.011
1st
3
4.880 +/- 0.249
OpenBenchmarking.orgDistribution Of Public Results - Device: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of State441 Results Range From 0 To 11 Seconds0.9171.8342.7513.6684.5855.5026.4197.3368.2539.1710.08711.00460120180240300

Based on OpenBenchmarking.org data, the selected test / test configuration (PyHPC Benchmarks 3.0 - Device: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of State) has an average run-time of 3 minutes. By default this test profile is set to run at least 3 times but may increase if the standard deviation exceeds pre-defined defaults or other calculations deem additional runs necessary for greater statistical accuracy of the result.

OpenBenchmarking.orgMinutesTime Required To Complete BenchmarkDevice: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of StateRun-Time48121620Min: 1 / Avg: 2.42 / Max: 13

Based on public OpenBenchmarking.org results, the selected test / test configuration has an average standard deviation of 0.1%.

OpenBenchmarking.orgPercent, Fewer Is BetterAverage Deviation Between RunsDevice: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of StateDeviation246810Min: 0 / Avg: 0.07 / Max: 2

Does It Scale Well With Increasing Cores?

No, based on the automated analysis of the collected public benchmark data, this test / test settings does not generally scale well with increasing CPU core counts. Data based on publicly available results for this test / test settings, separated by vendor, result divided by the reference CPU clock speed, grouped by matching physical CPU core count, and normalized against the smallest core count tested from each vendor for each CPU having a sufficient number of test samples and statistically significant data.

IntelAMDOpenBenchmarking.orgRelative Core Scaling To BasePyHPC Benchmarks CPU Core ScalingDevice: CPU - Backend: Numpy - Project Size: 4194304 - Benchmark: Equation of State46812641280.71881.43762.15642.87523.594

Tested CPU Architectures

This benchmark has been successfully tested on the below mentioned architectures. The CPU architectures listed is where successful OpenBenchmarking.org result uploads occurred, namely for helping to determine if a given test is compatible with various alternative CPU architectures.

CPU Architecture
Kernel Identifier
Verified On
Intel / AMD x86 64-bit
x86_64
(Many Processors)
ARMv8 64-bit
arm64
Apple M1
ARMv8 64-bit
aarch64
ARMv8 Neoverse-N1, ARMv8 Neoverse-V1, Ampere ARMv8 Neoverse-N1 128-Core, Ampere ARMv8 Neoverse-N1 256-Core, Ampere eMAG ARMv8 32-Core, Apple M1, Apple M2

Recent Test Results

OpenBenchmarking.org Results Compare

1 System - 90 Benchmark Results

Intel Core i7-8650U - Intel NUC7i7DNB - Intel Xeon E3-1200 v6

Ubuntu 22.04 - 5.15.0-53-generic - GCC 11.3.0

1 System - 90 Benchmark Results

Intel Core i7-8650U - Intel NUC7i7DNB - Intel Xeon E3-1200 v6

Ubuntu 22.04 - 5.15.0-53-generic - GCC 11.3.0

1 System - 106 Benchmark Results

Intel Core i7-10710U - Intel NUC10i7FNB - Intel Comet Lake PCH-LP

Ubuntu 22.10 - 5.19.0-23-generic - GNOME Shell 43.0

1 System - 104 Benchmark Results

AMD Ryzen 7 PRO 5850U - LENOVO 21A0003QUS - AMD Renoir

Ubuntu 22.10 - 5.19.0-23-generic - KDE Plasma 5.25.5

1 System - 147 Benchmark Results

AMD Ryzen 5 5500U - ASUS UX425UG v1.0 - AMD Renoir

Ubuntu 22.10 - 5.19.0-23-generic - X Server 1.21.1.4

2 Systems - 384 Benchmark Results

Intel Core i9-13900K - ASUS PRIME Z790-P WIFI - Intel Device 7a27

Clear Linux OS 37600 - 6.0.7-1207.native - GNOME Shell 43.0

1 System - 86 Benchmark Results

ARMv8 - Parallels ARM Virtual Machine v0.1 - 2048MB

Ubuntu 22.04 - 5.15.0-41-generic - GNOME Shell 42.2

1 System - 384 Benchmark Results

Intel Core i9-13900K - ASUS PRIME Z790-P WIFI - Intel Device 7a27

Ubuntu 22.10 - 5.19.0-23-generic - GNOME Shell 43.0

1 System - 380 Benchmark Results

Intel Core i9-13900K - ASUS PRIME Z790-P WIFI - Intel Device 7a27

Ubuntu 22.10 - 5.19.0-23-generic - GNOME Shell 43.0

1 System - 351 Benchmark Results

Intel Core i5-13600K - ASUS PRIME Z790-P WIFI - Intel Device 7a27

Ubuntu 22.10 - 5.19.0-23-generic - GNOME Shell 43.0

1 System - 149 Benchmark Results

Apple M1 - Apple MacBook Pro - 16GB

macOS 11.7 - 20.6.0 - GCC 13.0.0 + Clang 13.0.0

1 System - 147 Benchmark Results

Apple M1 - Apple Mac mini - 8GB

macOS 12.0.1 - 21.1.0 - GCC 13.0.0 + Clang 13.0.0 + Xcode 13.1

1 System - 147 Benchmark Results

Apple M1 - Apple Mac mini - 8GB

macOS 12.0.1 - 21.1.0 - GCC 13.0.0 + Clang 13.0.0 + Xcode 13.1

1 System - 80 Benchmark Results

Apple M1 - Apple MacBook Pro - 16GB

macOS 11.7 - 20.6.0 - GCC 13.0.0 + Clang 13.0.0

1 System - 80 Benchmark Results

Apple M1 - Apple MacBook Pro - 16GB

macOS 11.7 - 20.6.0 - GCC 13.0.0 + Clang 13.0.0

Most Popular Test Results

OpenBenchmarking.org Results Compare

15 Systems - 182 Benchmark Results

Intel Core i5-2500K - SAPPHIRE Pure Black P67 Hydra - Intel 2nd Generation Core DRAM

Ubuntu 21.10 - 5.16.0-051600rc8-generic - GNOME Shell 40.5

11 Systems - 119 Benchmark Results

Intel Core i5-11600K - ASUS ROG STRIX Z590-I GAMING WIFI - Intel Tiger Lake-H

Ubuntu 21.10 - 5.16.0-051600rc8-generic - GNOME Shell 40.5

13 Systems - 333 Benchmark Results

AMD Ryzen 9 5900X 12-Core - ASUS ROG CROSSHAIR VIII HERO - AMD Starship

Ubuntu 22.04 - 6.0.0-060000rc1daily20220820-generic - GNOME Shell 42.2

4 Systems - 98 Benchmark Results

AMD Ryzen Threadripper 3970X 32-Core - ASUS ROG ZENITH II EXTREME - AMD Starship

Ubuntu 20.10 - 5.11.0-rc6-phx - GNOME Shell 3.38.1

2 Systems - 161 Benchmark Results

Intel Core i3-7100 - Gigabyte B250M-DS3H-CF - Intel Xeon E3-1200 v6

Ubuntu 20.10 - 5.8.0-55-generic - GNOME Shell 3.38.1

3 Systems - 146 Benchmark Results

Intel Core i5-10600K - ASUS PRIME Z490M-PLUS - Intel Comet Lake PCH

Ubuntu 20.10 - 5.11.0-051100rc2daily20210106-generic - GNOME Shell 3.38.1

2 Systems - 219 Benchmark Results

Apple M1 - Apple Mac mini - 8GB

Arch Linux ARM - 5.19.0-rc7-asahi-2-1-ARCH - KDE Plasma 5.25.4

3 Systems - 268 Benchmark Results

Apple M1 - Apple Mac mini - 8GB

Arch Linux ARM - 5.17.0-rc7-asahi-next-20220310-5-1-ARCH - KDE Plasma 5.24.3

6 Systems - 301 Benchmark Results

2 Systems - 350 Benchmark Results

Ampere eMAG ARMv8 - AmpereComputing OSPREY - Applied Micro Circuits X-Gene

Ubuntu 20.04 - 5.7.0-050700-generic - GNOME Shell 3.36.4

3 Systems - 112 Benchmark Results

Intel Core i7-5600U - LENOVO 20BSCTO1WW - Intel Broadwell-U-OPI

Ubuntu 21.10 - 5.13.0-21-generic - GNOME Shell 40.5

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