hmmertest

2 x Intel Xeon Gold 6342 testing with a Aquarius Server 621AC AQC621AC (L0.17 BIOS) and ASPEED on Ubuntu 23.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2410042-NE-HMMERTEST19.

hmmertestProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDesktopDisplay ServerCompilerFile-SystemScreen Resolution2 x Intel Xeon Gold 63422 x Intel Xeon Gold 6342 @ 3.50GHz (48 Cores / 96 Threads)Aquarius Server 621AC AQC621AC (L0.17 BIOS)Intel Ice Lake IEH2016GB4 x 960GB SAMSUNG MZQL2960HCJR-00A07 + 200GB INTEL SSDPEL1K200GA + 480GB INTEL SSDSCKKB48 + 1918GB MR9560-16iASPEEDIntel I225-LM + 4 x Intel E810-C for SFPUbuntu 23.046.2.0-39-generic (x86_64)GNOME Shell 44.3X Server 1.21.1.7GCC 12.3.0ext41024x768OpenBenchmarking.org- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-DAPbBt/gcc-12-12.3.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-DAPbBt/gcc-12-12.3.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: intel_pstate powersave (EPP: balance_performance) - CPU Microcode: 0xd0003b9- gather_data_sampling: Mitigation of Microcode + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Mitigation of Clear buffers; SMT vulnerable + retbleed: Not affected + spec_rstack_overflow: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS IBPB: conditional RSB filling PBRSB-eIBRS: SW sequence + srbds: Not affected + tsx_async_abort: Not affected

hmmertesthmmer: Pfam Database SearchStandard ErrorStandard Deviation2 x Intel Xeon Gold 6342173.6230.260.25%OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Search2 x Intel Xeon Gold 63424080120160200SE +/- 0.26, N = 3173.621. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi

Phoronix Test Suite v10.8.5