gromacs embree 4 epyc genoa

2 x AMD EPYC 9654 96-Core testing with a AMD Titanite_4G (RTI1002E BIOS) and ASPEED on Ubuntu 22.10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 2302094-NE-GROMACSEM40
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a
February 09 2023
  5 Minutes
b
February 09 2023
  14 Minutes
c
February 09 2023
  5 Minutes
d
February 09 2023
  5 Minutes
e
February 09 2023
  5 Minutes
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a

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

b

c

d

e

Processor: 2 x AMD EPYC 9654 96-Core @ 2.40GHz (192 Cores / 384 Threads), Motherboard: AMD Titanite_4G (RTI1002E BIOS), Chipset: AMD Device 14a4, Memory: 1520GB, Disk: 2 x 1920GB SAMSUNG MZWLJ1T9HBJR-00007, Graphics: ASPEED, Network: Broadcom NetXtreme BCM5720 PCIe

OS: Ubuntu 22.10, Kernel: 6.2.0-rc3-phx-tip-x86-cpu (x86_64), Desktop: GNOME Shell 43.1, Display Server: X Server 1.21.1.4, Vulkan: 1.3.224, Compiler: GCC 12.2.0, File-System: ext4, Screen Resolution: 1024x768

gromacs embree 4 epyc genoaOpenBenchmarking.orgPhoronix Test Suite2 x AMD EPYC 9654 96-Core @ 2.40GHz (192 Cores / 384 Threads)AMD Titanite_4G (RTI1002E BIOS)AMD Device 14a41520GB2 x 1920GB SAMSUNG MZWLJ1T9HBJR-00007ASPEEDBroadcom NetXtreme BCM5720 PCIeUbuntu 22.106.2.0-rc3-phx-tip-x86-cpu (x86_64)GNOME Shell 43.1X Server 1.21.1.41.3.224GCC 12.2.0ext41024x768ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDesktopDisplay ServerVulkanCompilerFile-SystemScreen ResolutionGromacs Embree 4 Epyc Genoa BenchmarksSystem Logs- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d - itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

abcdeResult OverviewPhoronix Test Suite100%101%102%103%103%MemcachedMemcachedMemcachedEmbreeEmbreeEmbreeEmbreeEmbreeEmbreeGROMACS1:51:1001:10Pathtracer ISPC - Asian Dragon ObjPathtracer ISPC - Asian DragonPathtracer ISPC - CrownPathtracer - Asian DragonPathtracer - CrownPathtracer - Asian Dragon ObjMPI CPU - water_GMX50_bare

gromacs embree 4 epyc genoamemcached: 1:100memcached: 1:10memcached: 1:5gromacs: MPI CPU - water_GMX50_bareembree: Pathtracer - Asian Dragon Objembree: Pathtracer ISPC - Asian Dragon Objembree: Pathtracer - Crownembree: Pathtracer - Asian Dragonembree: Pathtracer ISPC - Crownembree: Pathtracer ISPC - Asian Dragonabcde2657866.733028355.352509625.0618.851171.1105188.1317176.7569192.304191.1912219.1182638354.603054604.412441389.8518.875170.9362190.2857176.5972191.6332191.2989220.15982594031.563026218.922501576.7518.903170.8754188.8625177.4332192.6542192.0371220.44692634472.493063552.152426065.3518.883170.5511188.7724176.6524192.5328191.2018220.63782613553.83020786.622503772.2518.885171.1297190.3673177.4132192.4053190.9111220.6257OpenBenchmarking.org

Memcached

Memcached is a high performance, distributed memory object caching system. This Memcached test profiles makes use of memtier_benchmark for excuting this CPU/memory-focused server benchmark. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgOps/sec, More Is BetterMemcached 1.6.18Set To Get Ratio: 1:100abcde600K1200K1800K2400K3000KSE +/- 5025.26, N = 32657866.732638354.602594031.562634472.492613553.801. (CXX) g++ options: -O2 -levent_openssl -levent -lcrypto -lssl -lpthread -lz -lpcre

OpenBenchmarking.orgOps/sec, More Is BetterMemcached 1.6.18Set To Get Ratio: 1:10abcde700K1400K2100K2800K3500KSE +/- 18344.67, N = 33028355.353054604.413026218.923063552.153020786.621. (CXX) g++ options: -O2 -levent_openssl -levent -lcrypto -lssl -lpthread -lz -lpcre

OpenBenchmarking.orgOps/sec, More Is BetterMemcached 1.6.18Set To Get Ratio: 1:5abcde500K1000K1500K2000K2500KSE +/- 23089.73, N = 32509625.062441389.852501576.752426065.352503772.251. (CXX) g++ options: -O2 -levent_openssl -levent -lcrypto -lssl -lpthread -lz -lpcre

GROMACS

The GROMACS (GROningen MAchine for Chemical Simulations) molecular dynamics package testing with the water_GMX50 data. This test profile allows selecting between CPU and GPU-based GROMACS builds. Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2023Implementation: MPI CPU - Input: water_GMX50_bareabcde510152025SE +/- 0.00, N = 318.8518.8818.9018.8818.891. (CXX) g++ options: -O3

Embree

Intel Embree is a collection of high-performance ray-tracing kernels for execution on CPUs (and GPUs via SYCL) and supporting instruction sets such as SSE, AVX, AVX2, and AVX-512. Embree also supports making use of the Intel SPMD Program Compiler (ISPC). Learn more via the OpenBenchmarking.org test page.

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer - Model: Asian Dragon Objabcde4080120160200SE +/- 0.26, N = 3171.11170.94170.88170.55171.13MIN: 166.89 / MAX: 177.24MIN: 166.7 / MAX: 177.65MIN: 167.02 / MAX: 175.74MIN: 166.75 / MAX: 175.5MIN: 167.36 / MAX: 176.53

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer ISPC - Model: Asian Dragon Objabcde4080120160200SE +/- 0.27, N = 3188.13190.29188.86188.77190.37MIN: 184.06 / MAX: 194.4MIN: 185.8 / MAX: 196.69MIN: 184.97 / MAX: 195.65MIN: 184.46 / MAX: 196.03MIN: 186.6 / MAX: 195.39

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer - Model: Crownabcde4080120160200SE +/- 0.15, N = 3176.76176.60177.43176.65177.41MIN: 171.97 / MAX: 183.78MIN: 171.35 / MAX: 185.63MIN: 172.95 / MAX: 184.44MIN: 171.59 / MAX: 189.18MIN: 172.59 / MAX: 186.6

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer - Model: Asian Dragonabcde4080120160200SE +/- 0.46, N = 3192.30191.63192.65192.53192.41MIN: 188.18 / MAX: 198.97MIN: 187.12 / MAX: 205.67MIN: 188.57 / MAX: 198.77MIN: 188.89 / MAX: 198.49MIN: 188.82 / MAX: 200.61

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer ISPC - Model: Crownabcde4080120160200SE +/- 0.14, N = 3191.19191.30192.04191.20190.91MIN: 184.88 / MAX: 200.52MIN: 184.91 / MAX: 201.98MIN: 186.54 / MAX: 200.04MIN: 185.39 / MAX: 201MIN: 184.91 / MAX: 201.53

OpenBenchmarking.orgFrames Per Second, More Is BetterEmbree 4.0Binary: Pathtracer ISPC - Model: Asian Dragonabcde50100150200250SE +/- 0.12, N = 3219.12220.16220.45220.64220.63MIN: 214.45 / MAX: 225.84MIN: 215.06 / MAX: 227.79MIN: 215.85 / MAX: 227.27MIN: 216.55 / MAX: 226.56MIN: 215.98 / MAX: 227.58

a

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2023 15:23 by user phoronix.

b

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2023 15:34 by user phoronix.

c

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2023 15:51 by user phoronix.

d

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2023 15:57 by user phoronix.

e

Processor: 2 x AMD EPYC 9654 96-Core @ 2.40GHz (192 Cores / 384 Threads), Motherboard: AMD Titanite_4G (RTI1002E BIOS), Chipset: AMD Device 14a4, Memory: 1520GB, Disk: 2 x 1920GB SAMSUNG MZWLJ1T9HBJR-00007, Graphics: ASPEED, Network: Broadcom NetXtreme BCM5720 PCIe

OS: Ubuntu 22.10, Kernel: 6.2.0-rc3-phx-tip-x86-cpu (x86_64), Desktop: GNOME Shell 43.1, Display Server: X Server 1.21.1.4, Vulkan: 1.3.224, Compiler: GCC 12.2.0, File-System: ext4, Screen Resolution: 1024x768

Kernel Notes: Transparent Huge Pages: madvise
Compiler Notes: --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-cet --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,d,fortran,objc,obj-c++,m2 --enable-libphobos-checking=release --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-defaulted --enable-offload-targets=nvptx-none=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-nvptx/usr,amdgcn-amdhsa=/build/gcc-12-U8K4Qv/gcc-12-12.2.0/debian/tmp-gcn/usr --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v
Processor Notes: Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa10110d
Security Notes: itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + mmio_stale_data: Not affected + retbleed: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Enhanced / Automatic IBRS IBPB: conditional RSB filling PBRSB-eIBRS: Not affected + srbds: Not affected + tsx_async_abort: Not affected

Testing initiated at 9 February 2023 16:03 by user phoronix.