2022-07-15-0850

KVM testing on AlmaLinux 8.6 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2207158-NE-20220715055&grr.

2022-07-15-0850ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem Layer16 x AMD EPYC16 x AMD EPYC (with IBPB) (16 Cores)RDO OpenStack Compute (1.11.0-2.el7 BIOS)Intel 440FX 82441FX PMC2 x 16 GB RAM100GBCirrus Logic GD 5446Red Hat Virtio deviceAlmaLinux 8.64.18.0-305.3.1.el8_4.x86_64 (x86_64)GCC 8.5.0 20210514xfs1024x768KVMOpenBenchmarking.org- Transparent Huge Pages: always- --build=x86_64-redhat-linux --disable-libmpx --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-cet --enable-checking=release --enable-gnu-indirect-function --enable-gnu-unique-object --enable-initfini-array --enable-languages=c,c++,fortran,lto --enable-multilib --enable-offload-targets=nvptx-none --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=x86-64 --with-gcc-major-version-only --with-isl --with-linker-hash-style=gnu --with-tune=generic --without-cuda-driver - CPU Microcode: 0x1000065- SELinux + itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional STIBP: disabled RSB filling + srbds: Not affected + tsx_async_abort: Not affected

2022-07-15-0850nwchem: C240 Buckyballlammps: 20k Atomscp2k: Fayalite-FISTgromacs: MPI CPU - water_GMX50_barenamd: ATPase Simulation - 327,506 Atomsopenfoam: motorBike - Execution Timeopenfoam: motorBike - Mesh Timeincompact3d: input.i3d 193 Cells Per Directioncloverleaf: Lagrangian-Eulerian Hydrodynamicspennant: sedovbigpennant: leblancbigminife: Smalldolfyn: Computational Fluid Dynamicsincompact3d: input.i3d 129 Cells Per Directionlulesh: lammps: Rhodopsin Proteinminife: Large16 x AMD EPYC8327.78.0711100.5741.0292.14576153.2472.2677.065218662.7349.0087036.447739281.8930.06419.46487816157.79558.040OpenBenchmarking.org

NWChem

Input: C240 Buckyball

OpenBenchmarking.orgSeconds, Fewer Is BetterNWChem 7.0.2Input: C240 Buckyball16 x AMD EPYC2K4K6K8K10K8327.71. (F9X) gfortran options: -lnwctask -lccsd -lmcscf -lselci -lmp2 -lmoints -lstepper -ldriver -loptim -lnwdft -lgradients -lcphf -lesp -lddscf -ldangchang -lguess -lhessian -lvib -lnwcutil -lrimp2 -lproperty -lsolvation -lnwints -lprepar -lnwmd -lnwpw -lofpw -lpaw -lpspw -lband -lnwpwlib -lcafe -lspace -lanalyze -lqhop -lpfft -ldplot -ldrdy -lvscf -lqmmm -lqmd -letrans -ltce -lbq -lmm -lcons -lperfm -ldntmc -lccca -ldimqm -lga -larmci -lpeigs -l64to32 -lopenblas -lpthread -lrt -llapack -lnwcblas -lmpi_usempif08 -lmpi_mpifh -lmpi -lcomex -lm -m64 -ffast-math -std=legacy -fdefault-integer-8 -finline-functions -O2

LAMMPS Molecular Dynamics Simulator

Model: 20k Atoms

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: 20k Atoms16 x AMD EPYC246810SE +/- 0.040, N = 38.0711. (CXX) g++ options: -O3 -pthread -lm

CP2K Molecular Dynamics

Input: Fayalite-FIST

OpenBenchmarking.orgSeconds, Fewer Is BetterCP2K Molecular Dynamics 8.2Input: Fayalite-FIST16 x AMD EPYC20040060080010001100.57

GROMACS

Implementation: MPI CPU - Input: water_GMX50_bare

OpenBenchmarking.orgNs Per Day, More Is BetterGROMACS 2022.1Implementation: MPI CPU - Input: water_GMX50_bare16 x AMD EPYC0.23150.4630.69450.9261.1575SE +/- 0.005, N = 31.0291. (CXX) g++ options: -O3 -pthread

NAMD

ATPase Simulation - 327,506 Atoms

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 Atoms16 x AMD EPYC0.48280.96561.44841.93122.414SE +/- 0.00096, N = 32.14576

OpenFOAM

Input: motorBike - Execution Time

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 9Input: motorBike - Execution Time16 x AMD EPYC306090120150153.241. (CXX) g++ options: -std=c++14 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm

OpenFOAM

Input: motorBike - Mesh Time

OpenBenchmarking.orgSeconds, Fewer Is BetterOpenFOAM 9Input: motorBike - Mesh Time16 x AMD EPYC163248648072.261. (CXX) g++ options: -std=c++14 -m64 -O3 -ftemplate-depth-100 -fPIC -fuse-ld=bfd -Xlinker --add-needed --no-as-needed -lfoamToVTK -ldynamicMesh -llagrangian -lgenericPatchFields -lfileFormats -lOpenFOAM -ldl -lm

Xcompact3d Incompact3d

Input: input.i3d 193 Cells Per Direction

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 193 Cells Per Direction16 x AMD EPYC20406080100SE +/- 0.51, N = 377.071. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

CloverLeaf

Lagrangian-Eulerian Hydrodynamics

OpenBenchmarking.orgSeconds, Fewer Is BetterCloverLeafLagrangian-Eulerian Hydrodynamics16 x AMD EPYC1428425670SE +/- 0.64, N = 362.731. (F9X) gfortran options: -O3 -march=native -funroll-loops -fopenmp

Pennant

Test: sedovbig

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: sedovbig16 x AMD EPYC1122334455SE +/- 0.09, N = 349.011. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

Pennant

Test: leblancbig

OpenBenchmarking.orgHydro Cycle Time - Seconds, Fewer Is BetterPennant 1.0.1Test: leblancbig16 x AMD EPYC816243240SE +/- 0.38, N = 336.451. (CXX) g++ options: -fopenmp -pthread -lmpi_cxx -lmpi

miniFE

Problem Size: Small

OpenBenchmarking.orgCG Mflops, More Is BetterminiFE 2.2Problem Size: Small16 x AMD EPYC2K4K6K8K10KSE +/- 42.47, N = 39281.891. (CXX) g++ options: -O3 -fopenmp -pthread -lmpi_cxx -lmpi

Dolfyn

Computational Fluid Dynamics

OpenBenchmarking.orgSeconds, Fewer Is BetterDolfyn 0.527Computational Fluid Dynamics16 x AMD EPYC714212835SE +/- 0.10, N = 330.06

Xcompact3d Incompact3d

Input: input.i3d 129 Cells Per Direction

OpenBenchmarking.orgSeconds, Fewer Is BetterXcompact3d Incompact3d 2021-03-11Input: input.i3d 129 Cells Per Direction16 x AMD EPYC510152025SE +/- 0.05, N = 319.461. (F9X) gfortran options: -cpp -O2 -funroll-loops -floop-optimize -fcray-pointer -fbacktrace -pthread -lmpi_usempif08 -lmpi_mpifh -lmpi

LULESH

OpenBenchmarking.orgz/s, More Is BetterLULESH 2.0.316 x AMD EPYC13002600390052006500SE +/- 21.16, N = 36157.801. (CXX) g++ options: -O3 -fopenmp -lm -pthread -lmpi_cxx -lmpi

LAMMPS Molecular Dynamics Simulator

Model: Rhodopsin Protein

OpenBenchmarking.orgns/day, More Is BetterLAMMPS Molecular Dynamics Simulator 29Oct2020Model: Rhodopsin Protein16 x AMD EPYC246810SE +/- 0.033, N = 38.0401. (CXX) g++ options: -O3 -pthread -lm

Phoronix Test Suite v10.8.5