hmmer-5900X-GUI

AMD Ryzen 9 5900X 12-Core testing with a MSI X570-A PRO (MS-7C37) v3.0 (H.E0 BIOS) and Sapphire AMD Radeon RX 6800/6800 XT / 6900 16GB on Artix rolling via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2110293-CRIM-HMMER5961.

hmmer-5900X-GUIProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDisplay ServerOpenGLVulkanCompilerFile-SystemScreen Resolutionhmmer-5900X-GUIAMD Ryzen 9 5900X 12-Core @ 3.70GHz (12 Cores / 24 Threads)MSI X570-A PRO (MS-7C37) v3.0 (H.E0 BIOS)AMD Starship/Matisse32GB500GB Corsair Force MP600 + Samsung SSD 970 EVO Plus 500GB + 3001GB Seagate ST3000DM008-2DM1 + 275GB Crucial CT275MX3 + 240GB CT240BX200SSD1 + 4001GB HGST HUS726T4TALSapphire AMD Radeon RX 6800/6800 XT / 6900 16GB (2660/1000MHz)AMD Navi 21 HDMI AudioP27h-20 + 2460Realtek RTL8111/8168/8411Artix rolling5.14.14-artix1-1 (x86_64)X Server 1.20.134.6 Mesa 21.2.4 (LLVM 12.0.1)1.2.182GCC 11.1.0 + LLVM 12.0.1ext43640x1920OpenBenchmarking.org- Transparent Huge Pages: madvise- --disable-libssp --disable-libstdcxx-pch --disable-libunwind-exceptions --disable-werror --enable-__cxa_atexit --enable-cet=auto --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-default-ssp --enable-gnu-indirect-function --enable-gnu-unique-object --enable-install-libiberty --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++,d --enable-lto --enable-multilib --enable-plugin --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-isl --with-linker-hash-style=gnu - Scaling Governor: acpi-cpufreq performance (Boost: Enabled) - CPU Microcode: 0xa201016- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: always-on RSB filling + srbds: Not affected + tsx_async_abort: Not affected

hmmer-5900X-GUIhmmer: Pfam Database SearchStandard ErrorStandard Deviationhmmer-5900X-GUI91.0770.020.04%OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.2Pfam Database Searchhmmer-5900X-GUI20406080100SE +/- 0.02, N = 391.081. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm -lmpi

Phoronix Test Suite v10.8.4