hmmertxt1

AMD Ryzen Embedded V2748 testing with a ASRock IMB-V2000 (L0.15 BIOS) and AMD Renoir on Ubuntu 20.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2105011-HA-HMMERTXT156.

hmmertxt1ProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelDesktopDisplay ServerVulkanCompilerFile-SystemAMD Ryzen Embedded V2748AMD Ryzen Embedded V2748 @ 2.90GHz (8 Cores / 16 Threads)ASRock IMB-V2000 (L0.15 BIOS)AMD Renoir Root Complex2 x 16384 MB DDR4-2933MT/s Kingston1000GB Samsung SSD 980 1TB + Samsung SSD 980 500GB + 2 x 10001GB Seagate ST10000NE0008-2PAMD Renoir (1600/1466MHz)Realtek RTL8125 2.5GbE + Realtek RTL8111/8168/8411Ubuntu 20.045.8.0-50-generic (x86_64)GNOME Shell 3.36.7X Server 1.20.91.2.131GCC 9.3.0ext4OpenBenchmarking.org- Transparent Huge Pages: madvise- --build=x86_64-linux-gnu --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-default-pie --enable-gnu-unique-object --enable-languages=c,ada,c++,go,brig,d,fortran,objc,obj-c++,gm2 --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc=auto --enable-offload-targets=nvptx-none=/build/gcc-9-HskZEa/gcc-9-9.3.0/debian/tmp-nvptx/usr,hsa --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --program-prefix=x86_64-linux-gnu- --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-default-libstdcxx-abi=new --with-gcc-major-version-only --with-multilib-list=m32,m64,mx32 --with-target-system-zlib=auto --with-tune=generic --without-cuda-driver -v - Scaling Governor: acpi-cpufreq conservative (Boost: Enabled) - CPU Microcode: 0x8600103- itlb_multihit: Not affected + l1tf: Not affected + mds: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of usercopy/swapgs barriers and __user pointer sanitization + spectre_v2: Mitigation of Full AMD retpoline IBPB: conditional IBRS_FW STIBP: conditional RSB filling + srbds: Not affected + tsx_async_abort: Not affected

hmmertxt1hmmer: Pfam Database SearchStandard ErrorStandard DeviationAMD Ryzen Embedded V2748183.7231.020.96%OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 3.3.1Pfam Database SearchAMD Ryzen Embedded V27484080120160200SE +/- 1.02, N = 3183.721. (CC) gcc options: -O3 -pthread -lhmmer -leasel -lm

Phoronix Test Suite v10.8.4