namd-test

2 x Intel Xeon E5-2697 v4 testing with a Intel S2600WT2R (SE5C610.86B.01.01.0028.121720182203 BIOS) and mgadrmfb on CentOS Linux 7 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/2103159-HA-2103151HA28.

namd-testProcessorMotherboardChipsetMemoryDiskGraphicsAudioNetworkMonitorOSKernelDisplay DriverCompilerFile-SystemScreen ResolutionDesktopDisplay ServerOpenGLIntel Core i5-6400Intel Xeon Gold 5218E5-2697-testIntel Core i5-6400 @ 3.30GHz (4 Cores)Dell 0XJ8C4 (2.6.1 BIOS)Intel Xeon E3-1200 v5/E3-15002 x 4096 MB DDR4-2400MT/s IM44GU48N24-FFFHA01000GB Seagate ST1000DM003-1ER1Intel HD 530 (950MHz)Realtek ALC3861Intel I219-VCentOS Linux 73.10.0-957.27.2.el7.x86_64 (x86_64)intelGCC 4.8.5 20150623xfs1920x1080Intel Xeon Gold 5218 @ 2.30GHz (16 Cores / 32 Threads)Supermicro X11DDW-L v1.11 (3.1 BIOS)Intel Sky Lake-E DMI3 Registers2 x 8192 MB DDR4-2400MT/s 18ASF1G72PZ-2G3B1QG240GB VK000240GWJPDGDI Generic2 x Intel X722 for 1GbE3.10.0-957.el7.x86_64 (x86_64)GNOME Shell 3.28.3X Server 1.20.11.1.01536x8242 x Intel Xeon E5-2697 v4 @ 3.60GHz (36 Cores / 72 Threads)Intel S2600WT2R (SE5C610.86B.01.01.0028.121720182203 BIOS)2 x 8192 MB DDR4-2400MT/s Micron 18ASF1G72PZ-2G3B1QG240GB INTEL SSDSC2KB24mgadrmfbSMB1920NW1440x900OpenBenchmarking.orgKernel Details- Transparent Huge Pages: alwaysProcessor Details- Intel Core i5-6400: Scaling Governor: intel_pstate performance - CPU Microcode: 0xcc- Intel Xeon Gold 5218: Scaling Governor: acpi-cpufreq conservative (Boost: Enabled) - CPU Microcode: 0x4000024- E5-2697-test: Scaling Governor: intel_pstate powersave - CPU Microcode: 0xb000030Security Details- Intel Core i5-6400: l1tf: Mitigation of PTE Inversion; VMX: vulnerable SMT disabled + mds: Vulnerable; SMT disabled + meltdown: Vulnerable + spec_store_bypass: Vulnerable + spectre_v1: Mitigation of Load fences __user pointer sanitization + spectre_v2: Vulnerable IBPB - Intel Xeon Gold 5218: SELinux + l1tf: Not affected + meltdown: Not affected + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of Load fences __user pointer sanitization + spectre_v2: Mitigation of Enhanced IBRS - E5-2697-test: SELinux + l1tf: Mitigation of PTE Inversion + meltdown: Mitigation of PTI + spec_store_bypass: Mitigation of SSB disabled via prctl and seccomp + spectre_v1: Mitigation of Load fences __user pointer sanitization + spectre_v2: Mitigation of Full retpoline

namd-testnamd: ATPase Simulation - 327,506 AtomsDifferenceStandard ErrorStandard DeviationIntel Core i5-6400Intel Xeon Gold 5218E5-2697-test5.411941.00x0.030.81%1.569571.71x0.50%1.018881.81x0.27%OpenBenchmarking.org

NAMD

ATPase Simulation - 327,506 Atoms

OpenBenchmarking.orgdays/ns, Fewer Is BetterNAMD 2.14ATPase Simulation - 327,506 AtomsIntel Core i5-6400Intel Xeon Gold 5218E5-2697-test1.21772.43543.65314.87086.0885SE +/- 0.02546, N = 3SE +/- 0.00450, N = 3SE +/- 0.00158, N = 35.411941.569571.01888


Phoronix Test Suite v10.8.4