computational-biology-20171121035555

20171121035555

HTML result view exported from: https://openbenchmarking.org/result/1711219-TY-COMPUTATI70.

computational-biology-20171121035555ProcessorMotherboardMemoryDiskGraphicsOSKernelCompilerFile-SystemScreen ResolutionSystem Layer201711210355554 x Intel Core (Haswell no TSX) @ 2.29GHz (4 Cores)OpenStack Foundation Nova v13.1.216384MB25GBcirrusdrmfbUbuntu 16.04.3 LTS4.4.0-96-generic (x86_64)GCC 5.4.0 20160609aufs1024x768dockerOpenBenchmarking.org- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

computational-biology-20171121035555hmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentmrbayes: Primate Phylogeny Analysis2017112103555526.228.67594.55OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Search20171121035555612182430SE +/- 0.14, N = 1026.221. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignment20171121035555246810SE +/- 0.15, N = 208.671. (CC) gcc options: -O3 -lm -lpthread

Timed MrBayes Analysis

Primate Phylogeny Analysis

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MrBayes Analysis 3.1.2Primate Phylogeny Analysis20171121035555130260390520650SE +/- 3.09, N = 10594.55

Phoronix Test Suite v10.8.4