ubuntu-64gb-20c_digitalocean_computational-biology

Computational Biology Suite on Digital Ocean Ubuntu 20-core 64GB RAM 640GB SSD

HTML result view exported from: https://openbenchmarking.org/result/1603141-GA-UBUNTU64G20.

ubuntu-64gb-20c_digitalocean_computational-biologyProcessorMotherboardChipsetMemoryDiskGraphicsNetworkOSKernelCompilerFile-SystemScreen ResolutionSystem LayerIntel Xeon E5-2650L v320 x Intel Xeon E5-2650L v3 @ 1.80GHz (20 Cores)BochsIntel 440FX- 82441FX PMC64512MB630GBCirrus Logic GD 5446Red Hat Virtio deviceUbuntu 15.104.2.0-34-generic (x86_64)GCC 5.2.1 20151010ext41024x768KVMOpenBenchmarking.org- --build=x86_64-linux-gnu --disable-browser-plugin --disable-vtable-verify --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,ada,c++,java,go,d,fortran,objc,obj-c++ --enable-libmpx --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-multilib --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-default-libstdcxx-abi=new --with-multilib-list=m32,m64,mx32 --with-tune=generic -v

ubuntu-64gb-20c_digitalocean_computational-biologyhmmer: Pfam Database Searchmafft: Multiple Sequence AlignmentIntel Xeon E5-2650L v312.965.50OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchIntel Xeon E5-2650L v33691215SE +/- 0.08, N = 312.961. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentIntel Xeon E5-2650L v31.23752.4753.71254.956.1875SE +/- 0.18, N = 65.501. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4