Computational-BiologyPhoronixRubinZ

Intel Core i7-3930K testing with a Intel DX79TO and eVGA NVIDIA GeForce GTX 550 Ti 1024MB on Ubuntu 14.04 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1502059-SO-COMPUTATI83.

Computational-BiologyPhoronixRubinZProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorNetworkOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionnaIntel Core i7-3930K @ 3.20GHz (12 Cores)Intel DX79TOIntel Xeon E5/Core32768MB128GB OCZ VERTEX4eVGA NVIDIA GeForce GTX 550 Ti 1024MBRealtek ALC892VE248 + VE248Intel 82579LM Gigabit ConnectionUbuntu 14.043.13.0-45-generic (x86_64)Unity 7.2.3X Server 1.15.1nouveau 1.0.103.3 Mesa 10.1.3 Gallium 0.4GCC 4.8tmpfs1920x1080OpenBenchmarking.org- --build=x86_64-linux-gnu --disable-browser-plugin --disable-libmudflap --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-gtk-cairo --enable-java-awt=gtk --enable-java-home --enable-languages=c,c++,java,go,d,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-multiarch --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-abi=m64 --with-arch-32=i686 --with-arch-directory=amd64 --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64/jre --with-jvm-jar-dir=/usr/lib/jvm-exports/java-1.5.0-gcj-4.8-amd64 --with-jvm-root-dir=/usr/lib/jvm/java-1.5.0-gcj-4.8-amd64 --with-multilib-list=m32,m64,mx32 --with-tune=generic -v - Scaling Governor: acpi-cpufreq ondemand

Computational-BiologyPhoronixRubinZhmmer: Pfam Database Searchmafft: Multiple Sequence Alignmentna8.904.96OpenBenchmarking.org

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database Searchna246810SE +/- 0.04, N = 38.901. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence Alignmentna1.1162.2323.3484.4645.58SE +/- 0.15, N = 64.961. (CC) gcc options: -O3 -lm -lpthread

Phoronix Test Suite v10.8.4