Ubuntu 12.10 x86_64 AMD Opteron Linux

AMD Opteron 2384 testing with a TYAN S2927/S2927-E and AMD Radeon HD 4870 512MB on Ubuntu 12.10 via the Phoronix Test Suite.

Compare your own system(s) to this result file with the Phoronix Test Suite by running the command: phoronix-test-suite benchmark 1311075-SO-UBUNTU12183
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Bioinformatics 3 Tests
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Ubuntu 12.10
November 06 2013
 
Scientific Linux 6.4
November 07 2013
 
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Ubuntu 12.10 x86_64 AMD Opteron Linux - Phoronix Test Suite

Ubuntu 12.10 x86_64 AMD Opteron Linux

AMD Opteron 2384 testing with a TYAN S2927/S2927-E and AMD Radeon HD 4870 512MB on Ubuntu 12.10 via the Phoronix Test Suite.

HTML result view exported from: https://openbenchmarking.org/result/1311075-SO-UBUNTU12183&sro&grs.

Ubuntu 12.10 x86_64 AMD Opteron LinuxProcessorMotherboardChipsetMemoryDiskGraphicsAudioMonitorOSKernelDesktopDisplay ServerDisplay DriverOpenGLCompilerFile-SystemScreen ResolutionUbuntu 12.10Scientific Linux 6.4AMD Opteron 2384 @ 2.70GHz (4 Cores)TYAN S2927/S2927-ENVIDIA MCP554096MB64GB AGILITY-EXAMD Radeon HD 4870 512MBATI R6xx HDMIAcer P243WUbuntu 12.103.5.0-17-generic (x86_64)Xfce 4.10X Server 1.13.0radeon 6.99.992.1 Mesa 9.0.3 Gallium 0.4GCC 4.7ext41920x1200AMD ATI RV770 HDMI AudioScientific 6.42.6.32-358.2.1.el6.x86_64 (x86_64)GNOME 2.28.22.1 Mesa 9.0-devel Gallium 0.4GCC 4.4.7 20120313OpenBenchmarking.orgCompiler Details- Ubuntu 12.10: --build=x86_64-linux-gnu --disable-werror --enable-checking=release --enable-clocale=gnu --enable-gnu-unique-object --enable-languages=c,c++,go,fortran,objc,obj-c++ --enable-libstdcxx-debug --enable-libstdcxx-time=yes --enable-nls --enable-objc-gc --enable-plugin --enable-shared --enable-threads=posix --host=x86_64-linux-gnu --target=x86_64-linux-gnu --with-arch-32=i686 --with-tune=generic -v - Scientific Linux 6.4: --build=x86_64-redhat-linux --disable-dssi --disable-libjava-multilib --disable-libunwind-exceptions --enable-__cxa_atexit --enable-bootstrap --enable-checking=release --enable-gnu-unique-object --enable-java-awt=gtk --enable-java-maintainer-mode --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-libgcj-multifile --enable-shared --enable-threads=posix --mandir=/usr/share/man --with-arch_32=i686 --with-cloog --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --with-ppl --with-tune=generic Disk Details- Ubuntu 12.10: DEADLINE / data=ordered,errors=remount-ro,relatime,rwProcessor Details- Scaling Governor: powernow-k8 ondemandSystem Details- Ubuntu 12.10: Disk Scheduler: DEADLINE.- Scientific Linux 6.4: SELinux: Enabled.Disk Mount Options Details- Scientific Linux 6.4: barrier=1,data=ordered,relatime,rw,seclabel

Ubuntu 12.10 x86_64 AMD Opteron Linuxpostmark: Disk Transaction Performancec-ray: Total Timehmmer: Pfam Database Searchpgbench: TPC-B Transactions Per Secondmafft: Multiple Sequence Alignmenthimeno: Poisson Pressure Solverbuild-linux-kernel: Time To Compileapache: Static Web Page Servingffmpeg: H.264 HD To NTSC DVgraphics-magick: Local Adaptive Thresholdinggraphics-magick: Resizinggraphics-magick: Sharpenhpcc: Max Ping Pong Bandwidthhpcc: Rand Ring Bandwidthhpcc: Rand Ring Latencyhpcc: MPIRandomAccesshpcc: MPI FFThpcc: PTRANShpcc: HPLfs-mark: 4000 Files, 32 Sub Dirs, 1MB Sizefs-mark: 5000 Files, 1MB Size, 4 Threadsfs-mark: 1000 Files, 1MB SizeUbuntu 12.10Scientific Linux 6.4144272.4322.02586.3011.79535.01163.2723763.9632.656289432168.350598.716070.000760.034972.271360.633043.9338721.6538.1322.172659112.7227.49470.1912.81496.64155.83OpenBenchmarking.org

PostMark

Disk Transaction Performance

OpenBenchmarking.orgTPS, More Is BetterPostMark 1.51Disk Transaction PerformanceScientific Linux 6.4Ubuntu 12.106001200180024003000SE +/- 16.46, N = 3SE +/- 9.94, N = 3265914421. (CC) gcc options: -O3

C-Ray

Total Time

OpenBenchmarking.orgSeconds, Fewer Is BetterC-Ray 1.1Total TimeScientific Linux 6.4Ubuntu 12.10306090120150SE +/- 0.05, N = 3SE +/- 0.04, N = 3112.7272.431. (CC) gcc options: -lm -lpthread -O3

Timed HMMer Search

Pfam Database Search

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed HMMer Search 2.3.2Pfam Database SearchScientific Linux 6.4Ubuntu 12.10612182430SE +/- 0.04, N = 3SE +/- 0.06, N = 327.4922.021. (CC) gcc options: -O2 -pthread -lhmmer -lsquid -lm

PostgreSQL pgbench

TPC-B Transactions Per Second

OpenBenchmarking.orgTPS, More Is BetterPostgreSQL pgbench 8.4.11TPC-B Transactions Per SecondScientific Linux 6.4Ubuntu 12.10130260390520650SE +/- 5.08, N = 3SE +/- 3.71, N = 3470.19586.301. (CC) gcc options: -O2 -fno-strict-aliasing -fwrapv -lpgport -lpq -lcrypt -ldl -lm

Timed MAFFT Alignment

Multiple Sequence Alignment

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed MAFFT Alignment 6.864Multiple Sequence AlignmentScientific Linux 6.4Ubuntu 12.103691215SE +/- 0.27, N = 6SE +/- 0.01, N = 312.8111.791. (CC) gcc options: -O3 -lm -lpthread

Himeno Benchmark

Poisson Pressure Solver

OpenBenchmarking.orgMFLOPS, More Is BetterHimeno Benchmark 3.0Poisson Pressure SolverScientific Linux 6.4Ubuntu 12.10120240360480600SE +/- 1.61, N = 3SE +/- 1.01, N = 3496.64535.011. (CC) gcc options: -O3

Timed Linux Kernel Compilation

Time To Compile

OpenBenchmarking.orgSeconds, Fewer Is BetterTimed Linux Kernel Compilation 3.1Time To CompileScientific Linux 6.4Ubuntu 12.104080120160200SE +/- 1.14, N = 3SE +/- 1.00, N = 3155.83163.27

Apache Benchmark

Static Web Page Serving

OpenBenchmarking.orgRequests Per Second, More Is BetterApache Benchmark 2.4.3Static Web Page ServingUbuntu 12.105K10K15K20K25KSE +/- 125.77, N = 323763.961. (CC) gcc options: -shared -fPIC -O2 -pthread

FFmpeg

H.264 HD To NTSC DV

OpenBenchmarking.orgSeconds, Fewer Is BetterFFmpeg 2.0H.264 HD To NTSC DVUbuntu 12.10816243240SE +/- 0.04, N = 332.651. (CC) gcc options: -lavdevice -lavfilter -lavformat -lavcodec -lswresample -lswscale -lavutil -ldl -lXv -lX11 -lXext -lasound -lSDL -lm -pthread -lrt -std=c99 -fomit-frame-pointer -O3 -fno-math-errno -fno-signed-zeros -fno-tree-vectorize -MMD -MF -MT

GraphicsMagick

Operation: Local Adaptive Thresholding

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: Local Adaptive ThresholdingUbuntu 12.101428425670SE +/- 0.00, N = 3621. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

GraphicsMagick

Operation: Resizing

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: ResizingUbuntu 12.1020406080100SE +/- 0.33, N = 3891. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

GraphicsMagick

Operation: Sharpen

OpenBenchmarking.orgIterations Per Minute, More Is BetterGraphicsMagick 1.3.16Operation: SharpenUbuntu 12.101020304050SE +/- 0.00, N = 3431. (CC) gcc options: -std=gnu99 -fopenmp -O2 -pthread -lXext -lSM -lICE -lX11 -lz -lm -lgomp -lpthread

HPC Challenge

Test / Class: Max Ping Pong Bandwidth

OpenBenchmarking.orgMB/s, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Max Ping Pong BandwidthUbuntu 12.105001000150020002500SE +/- 2.17, N = 32168.351. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: Random Ring Bandwidth

OpenBenchmarking.orgMB/s, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Random Ring BandwidthUbuntu 12.10130260390520650SE +/- 0.77, N = 3598.721. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: Random Ring Latency

OpenBenchmarking.orgmsecs, Fewer Is BetterHPC Challenge 1.4.3Test / Class: Random Ring LatencyUbuntu 12.100.00020.00040.00060.00080.001SE +/- 0.00001, N = 30.000761. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: MPIRandomAccess

OpenBenchmarking.orgGUP/s, More Is BetterHPC Challenge 1.4.3Test / Class: MPIRandomAccessUbuntu 12.100.00790.01580.02370.03160.0395SE +/- 0.00047, N = 30.034971. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: MPI FFT

OpenBenchmarking.orgGFLOP/s, More Is BetterHPC Challenge 1.4.3Test / Class: MPI FFTUbuntu 12.100.51111.02221.53332.04442.5555SE +/- 0.00256, N = 32.271361. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: PTRANS

OpenBenchmarking.orgGB/s, More Is BetterHPC Challenge 1.4.3Test / Class: PTRANSUbuntu 12.100.14240.28480.42720.56960.712SE +/- 0.00732, N = 30.633041. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

HPC Challenge

Test / Class: HPL

OpenBenchmarking.orgGFLOPS, More Is BetterHPC Challenge 1.4.3Test / Class: HPLUbuntu 12.100.88511.77022.65533.54044.4255SE +/- 0.07022, N = 33.933871. (CC) gcc options: -fomit-frame-pointer -O3 -march=native -funroll-loops -lblas -lm -pthread -lmpi -lopen-rte -lopen-pal -ldl -lnsl -lutil 2. BLAS + Open MPI 1.4.5

FS-Mark

Test: 4000 Files, 32 Sub Dirs, 1MB Size

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 4000 Files, 32 Sub Dirs, 1MB SizeUbuntu 12.10510152025SE +/- 0.49, N = 621.651. (CC) gcc options: -static

FS-Mark

Test: 5000 Files, 1MB Size, 4 Threads

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 5000 Files, 1MB Size, 4 ThreadsUbuntu 12.10918273645SE +/- 2.66, N = 638.131. (CC) gcc options: -static

FS-Mark

Test: 1000 Files, 1MB Size

OpenBenchmarking.orgFiles/s, More Is BetterFS-Mark 3.3Test: 1000 Files, 1MB SizeUbuntu 12.10510152025SE +/- 1.13, N = 622.171. (CC) gcc options: -static


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