SPECFEM3D 1.1.0

pts/specfem3d-1.1.0 - 06 April 2024 - Update against SPECFEM3D 4.1.1

downloads.xml

<?xml version="1.0"?>
<!--Phoronix Test Suite v10.8.5-->
<PhoronixTestSuite>
  <Downloads>
    <Package>
      <URL>https://github.com/SPECFEM/specfem3d/archive/refs/tags/v4.1.1.tar.gz</URL>
      <MD5>68670be498bbaab7e8b8ffea66bfc3c3</MD5>
      <SHA256>cc950d76aa5f9deea72a263adbce6c4e77b6500f7c41eef5036f4dc882967e5f</SHA256>
      <FileName>specfem3d-4.1.1.tar.gz</FileName>
      <FileSize>351288513</FileSize>
    </Package>
  </Downloads>
</PhoronixTestSuite>

install.sh

#!/bin/sh
tar -xf specfem3d-4.1.1.tar.gz
cd specfem3d-4.1.1
if [ -d "/usr/include/openmpi-x86_64/" ]; then
  export MPI_INC="/usr/include/openmpi-x86_64/"
fi
./configure --enable-openmp
make all -j $NUM_CPU_CORES
echo $? > ~/install-exit-status
cd ~/
cat>specfem3d<<EOT
#!/bin/sh
cd specfem3d-4.1.1/EXAMPLES/applications
cd \$1
rm -f OUTPUT_FILES/output_solver.txt
sed -i '/^NPROC/d' DATA/Par_file
echo "NPROC                           = \$NUM_CPU_PHYSICAL_CORES" >> DATA/Par_file
OMP_NUM_THREADS=\$CPU_THREADS_PER_CORE ./run_this_example.sh > \$LOG_FILE 2>&1
echo \$? > ~/test-exit-status
cat OUTPUT_FILES/output_solver.txt >> \$LOG_FILE
EOT
chmod +x specfem3d

results-definition.xml

<?xml version="1.0"?>
<!--Phoronix Test Suite v10.8.5-->
<PhoronixTestSuite>
  <ResultsParser>
    <OutputTemplate> Total elapsed time in seconds =    #_RESULT_#</OutputTemplate>
    <LineHint>Total elapsed time in seconds</LineHint>
  </ResultsParser>
</PhoronixTestSuite>

test-definition.xml

<?xml version="1.0"?>
<!--Phoronix Test Suite v10.8.5-->
<PhoronixTestSuite>
  <TestInformation>
    <Title>SPECFEM3D</Title>
    <AppVersion>4.1.1</AppVersion>
    <Description>simulates acoustic (fluid), elastic (solid), coupled acoustic/elastic, poroelastic or seismic wave propagation in any type of conforming mesh of hexahedra. This test profile currently relies on CPU-based execution for SPECFEM3D and using a variety of their built-in examples/models for benchmarking.</Description>
    <ResultScale>Seconds</ResultScale>
    <Proportion>LIB</Proportion>
    <TimesToRun>3</TimesToRun>
  </TestInformation>
  <TestProfile>
    <Version>1.1.0</Version>
    <SupportedPlatforms>Linux</SupportedPlatforms>
    <SoftwareType>Scientific</SoftwareType>
    <TestType>Processor</TestType>
    <License>Free</License>
    <Status>Verified</Status>
    <ExternalDependencies>fortran-compiler, openmpi-development, build-utilities</ExternalDependencies>
    <EnvironmentSize>4800</EnvironmentSize>
    <ProjectURL>https://seg.ethz.ch/software/specfem3d.html</ProjectURL>
    <RepositoryURL>https://github.com/SPECFEM/specfem3d</RepositoryURL>
    <Maintainer>Michael Larabel</Maintainer>
  </TestProfile>
  <TestSettings>
    <Option>
      <DisplayName>Model</DisplayName>
      <Identifier>model</Identifier>
      <Menu>
        <Entry>
          <Name>Layered Halfspace</Name>
          <Value>layered_halfspace</Value>
          <Message>A model with different material layers; most demanding</Message>
        </Entry>
        <Entry>
          <Name>Water-layered Halfspace</Name>
          <Value>waterlayered_halfspace</Value>
          <Message>A model with fluid-solid coupling</Message>
        </Entry>
        <Entry>
          <Name>Homogeneous Halfspace</Name>
          <Value>homogeneous_halfspace</Value>
        </Entry>
        <Entry>
          <Name>Mount St. Helens</Name>
          <Value>Mount_StHelens</Value>
          <Message>A model with topography data</Message>
        </Entry>
        <Entry>
          <Name>Tomographic Model</Name>
          <Value>tomographic_model</Value>
          <Message>A model with a a tomographic file for the material description</Message>
        </Entry>
      </Menu>
    </Option>
  </TestSettings>
</PhoronixTestSuite>